Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1340 ATGCTAAAATATTTCCAAAATTTTCCTCTTCTATTGACGGTGTTGTTTCTGCTATGGAATCCCGCGATGGGTAAGAACGGGTGCGCAGAAAAATGTGGACGTGTTCACATTCAGTTTCCATTTCACCTCAGAAACAACAAGTTGAATCACACCACCACCACCTATCCTCCTGGGTTCGATCTGATCTGTACGGATGCACATCAGACCGTACTGGAACTCCCTTCTGTTCCAATAAAACTGTTTGTTAAAAACATAGATTACCAGTCGAAGCAAATCCAAATCTACGACCCTCAGAGTTGCCTTCCCAGGGAACTCTTGAAACTCGGAAATTCGTCTGTTTCGCCGTTTAAATTCCCATCGTTTGGCGGGAGTAATGTTTCCTTCTTCCGCTGCAACTCGCCGTCGTGCCCGATTCTGCAACTTGGATCTAGTAGCGAGTTTCTTGATCCAGAAATAGTATCTTGCACCAAGGTGAGTGATGTTTCCTCTGTCCAGTGGCTAGTAAGGGAAGATGGTGACTCGAGGAGCACTGTGGCTATGGAATGGTCCAAGCCCGATTGCAGTTCCTGTGAAGCACAGGGGCAGAAATGTAAATACAAGAATGGTAAACAAGGTGATGAAATTGAATGTTTTGTTTGCAAAACAAACAGGATTCGGAGATCAGTTATTGTACTTATTGCTGCAGAAGAAATACGAAACAGGGGGAATAGTTTGTTTGATTCTGTTTCTGCTTGTGGTCAAGGCATTGTTTTATGTGTATGA 762 0.437 MLKYFQNFPLLLTVLFLLWNPAMGKNGCAEKCGRVHIQFPFHLRNNKLNHTTTTYPPGFDLICTDAHQTVLELPSVPIKLFVKNIDYQSKQIQIYDPQSCLPRELLKLGNSSVSPFKFPSFGGSNVSFFRCNSPSCPILQLGSSSEFLDPEIVSCTKVSDVSSVQWLVREDGDSRSTVAMEWSKPDCSSCEAQGQKCKYKNGKQGDEIECFVCKTNRIRRSVIVLIAAEEIRNRGNSLFDSVSACGQGIVLCV 253
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1340 253 Pfam Wall-associated receptor kinase galacturonan-binding 28 96 IPR025287 GO:0030247
Aed3g1340 253 PANTHER RING-H2 FINGER PROTEIN ATL21A-RELATED 8 212 - -
Aed3g1340 253 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 8 212 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed3g1340 Aed-Chr3 15637150 15638635 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1340 29 224 C3H Transcription Factor Family AT2G46495 28.279 2.76e-13 66.6