Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1298 AGAGTAAGTGATTCTCACATACTGACTGATGATGATAACAATAGTGCCAATTCCTGGCACGTTTTTGATCCTATCCGCTTCATATCGGATCCGAATTTGAACATTCAACCCTTGATTCCGCAATCCTCTCCGAATTTTGCTTTCCGAATCGATGGTTGCAGTACCTTAGAGTTTAAAAAAGGTACATCGGTTAGATGGTATGCAGCAGTTGTGTCTTTGGTTGTTCAAGCTGGAACCTTTGCCAACAGAGTGAAAATCACGGGATTTGGGAGGAGTTTGCGGGCAGTTCAGAGTTTTTCTCATTGGCCGATTCGTGAATACAAGAAAACAACAGGAATGATGGTTGATACGGGTTCTATGTCAAGGGCTGGAACCCTTGTTGATATGGTGCCGGAGAAAGATGACGATGGTCGGTTTGCCAGTGGAGGGTGGAAAAGTGAAGATGGAGGACTTAGCTGTGGGTATTCAAGTTTTAGGGGAAAGAGAGTGACAATGGAGGATTTTTATGATGTTAAGACATTGAAGATTGGTGGCCAATCAATATGCTTGTTTGGAATATTTGATGGTCACGGTGGTTCTCGTGCTGCTGAGTATTTAAAGGAGCATCTTTTTGATAATCTCTTGAAGCATCCAAAATTTTTGACAGATGCCAAATTGGCTATAAGTGAAACATATCAACAGACTGATGCTAATTTTCTGGATTCCGAAAAGGACACCTTCAGGGATGATGGATCTACAGCTTCAACAGCGGTTTTGATTGATAACCATCTTTTTGTAGCTAATGTTGGAGATTCTAGAACTATAATTTCAAAAGCTGGTAAAGCAATTGCTCTCTCTGAGGATCATAAACCAAATAGAAGTGATGAGCGAAAGAGAATCGAGAATGCTGGTGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTAGGAGGGGTGCTAGCAATGTCTCGTGCCTTTGGTAACCGTATGCTGAAGCAATTTGTAGTAGCAGAACCTGAGATCCAGGACCAGGTGATAGATGAACAAATTGAACTGCTTATTCTTGCAAGTGATGGACTCTGGGATGTAATACAGAATGACGATGCTGTTTCTCTTGCCCGCACTGAAGAGGATCCTGAGGCAGCTTCTCGAAAGTTAACAGAAGCAGCATTTTCTCGTGGAAGTGCAGATAACATTACATGCATTGTGGTGCGATTCCATCATCATGAGAAGAAAAAAGCAGACCTAGCTAATCCTGACAAAGCAGAATCAACTAGTGCTCAGCATAAGTAG 1269 0.4247 RVSDSHILTDDDNNSANSWHVFDPIRFISDPNLNIQPLIPQSSPNFAFRIDGCSTLEFKKGTSVRWYAAVVSLVVQAGTFANRVKITGFGRSLRAVQSFSHWPIREYKKTTGMMVDTGSMSRAGTLVDMVPEKDDDGRFASGGWKSEDGGLSCGYSSFRGKRVTMEDFYDVKTLKIGGQSICLFGIFDGHGGSRAAEYLKEHLFDNLLKHPKFLTDAKLAISETYQQTDANFLDSEKDTFRDDGSTASTAVLIDNHLFVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDQVIDEQIELLILASDGLWDVIQNDDAVSLARTEEDPEAASRKLTEAAFSRGSADNITCIVVRFHHHEKKKADLANPDKAESTSAQHK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1298 422 Gene3D - 144 422 IPR036457 -
Aed3g1298 422 Pfam Protein phosphatase 2C 154 391 IPR001932 -
Aed3g1298 422 ProSitePatterns PPM-type phosphatase domain signature. 183 191 IPR000222 GO:0043169
Aed3g1298 422 ProSiteProfiles PPM-type phosphatase domain profile. 152 398 IPR001932 -
Aed3g1298 422 SMART PP2C_4 142 396 IPR001932 -
Aed3g1298 422 CDD PP2Cc 152 398 IPR001932 -
Aed3g1298 422 PANTHER ALPHABET, ISOFORM E-RELATED 104 406 - -
Aed3g1298 422 SUPERFAMILY PP2C-like 150 400 IPR036457 -
Aed3g1298 422 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 104 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1298 Aed-Chr3 13367024 13383699 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1298 107 416 PP2C-type Phosphatase Gene Family AT5G53140 73.226 1.40e-172 488