Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1286 ATGAAAAACCTCCTCTTCCGATTCCCCCATTCGCAAAACTACAGAGACAGAAGATCCGGTCCCGTTATTTCTCACTCGTCACTTTCCCGAGAAAATTCACCCGGGAAAGGGAAAGAAAACGCCAAAAACCCTAGAAAACACAAAAATCCAAAACAAACTCGATCCAGCGAAATGGATCATTATAAGGTTCTAGGCCTGCACCGAACCGCGACCAATGAAGAAATCAAAGCGGCGTTCAAGAGGCTAGCGTTCCAGTTCCACCCAGACAAGCATTCCCAATCGCCGAAGGCCGTTAGGGAAAACGCCACACTTCGATTCAAGCAGGTCTCTGAGGCCTACGAGGTTCTCATGGACGATCGCAAGCGCGCCGACTACAATATCCGGCGGAGCTCCGGTGCCGGTGCCGGAAGCAGCTACTATTCTCAGTATAGCTACGGATACGGTAGGACTGGGAACAGTTATTATGAGTATAAACCTAGGTCTGGTGGTGGTGGTGGCGGCTTCGCGTCCAAGTTTGAACTCGCTTTTCGGATTTTGACCGCTCGGTCTTCGCTTCTCAATCTTGGCTTCGCAGCAGCTATATTAGGGGGGATTGTTGTCATTGATTCAAGTGGAGAATCCTTATGGAGAATGCAAAATTCAGGGAAATCTTTTGAAGAAGCCATGAAGTCTATTGAGGAAGCCAAAGCGTATAGAGAAGATGACATAAAGGAACGTCCATGA 723 0.4841 MKNLLFRFPHSQNYRDRRSGPVISHSSLSRENSPGKGKENAKNPRKHKNPKQTRSSEMDHYKVLGLHRTATNEEIKAAFKRLAFQFHPDKHSQSPKAVRENATLRFKQVSEAYEVLMDDRKRADYNIRRSSGAGAGSSYYSQYSYGYGRTGNSYYEYKPRSGGGGGGFASKFELAFRILTARSSLLNLGFAAAILGGIVVIDSSGESLWRMQNSGKSFEEAMKSIEEAKAYREDDIKERP 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1286 240 SMART dnaj_3 58 121 IPR001623 -
Aed3g1286 240 PRINTS DnaJ domain signature 61 79 IPR001623 -
Aed3g1286 240 PRINTS DnaJ domain signature 101 121 IPR001623 -
Aed3g1286 240 PRINTS DnaJ domain signature 79 94 IPR001623 -
Aed3g1286 240 Pfam DnaJ domain 59 126 IPR001623 -
Aed3g1286 240 PANTHER CHAPERONE PROTEIN DNAJ 72 58 223 - -
Aed3g1286 240 PANTHER CO-CHAPERONE PROTEIN DJLA 58 223 - -
Aed3g1286 240 CDD DnaJ 59 118 IPR001623 -
Aed3g1286 240 MobiDBLite consensus disorder prediction 1 59 - -
Aed3g1286 240 ProSiteProfiles dnaJ domain profile. 59 129 IPR001623 -
Aed3g1286 240 Gene3D DnaJ domain 41 140 IPR036869 -
Aed3g1286 240 ProSitePatterns Nt-dnaJ domain signature. 106 125 IPR018253 -
Aed3g1286 240 SUPERFAMILY Chaperone J-domain 54 152 IPR036869 -
Aed3g1286 240 MobiDBLite consensus disorder prediction 17 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1286 Aed-Chr3 12578460 12583366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1286 53 130 C2H2 Transcription Factor Family AT1G74250 39.744 4.50e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1286 - - gmx:100782769 319.316