Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1270 ATGGGATCTCAAGGTGGGGCATTGCAAAAGCCAAAGACTACTACTACTACCCCTTTGGCTAGGCAAGGTTCCTTGTATAATCTGACCCTTGATGAGGTGCATAACCAGCTTGGGGATTTGGGGAAACCACTTGGCAGCATGAATCTTGATGAGCTTCTGAAAAGTGTGTGGAGTGCCGAAGCCGGTGGTGAGGCCTCTGGCTTTGACTTTGGTGTTGGTGTTGGTGGTGGCGGTGATGGTGATGCTTCTGGCTCCTCTCTGAATCCTCAGGGGAGCCTAACTTTGTCTAGGGGTCTTAGCAATAAAACTGTTGATGAGGTGTGGAGAGATATGCAACTGAAAAAGGGGACTGATAGGGTTAAGAAGATCCAGCGGCAAAGACAGCCTACAACACTTGGTGAGATGACTCTGGAGGACTTCTTGGTGAAGGCTGGAGTGGTTACTGAAGCTTTGCCTACAAAGGGGGTGGATTTGAATGGGGGGCCCTCCTCGCAAAACGGCGGCCATTGGATGCGATACCAGTTTCCTTCCACGGCGCAGCAGCAGCCGGATAGTATGATGGGGGGTTATGTGGCTGGCCATGCCCTTCAGCAGCCTCCTTTCCAGGTTGCAGTGAATCTGGTTTTGGATGCTTCTGCATACTCCGAGCCACCGTGTTCTTTGATTGGTGGCGCTTTGTTGGATACACAGACTCCGGATGGTCGGAAAAGGCTCGCCCCTGGTGGCGATGTGGTGGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCTGCTCGTTCGCGAGCAAGAAGACAGGCATACACACAAGAACTGGAGATTAAAGTTTCGCGATTAGAAGAGGAGAATGAAAGGCTTAGAAGACTGAATAAGATGGAGAAGGCATTGCCATCTGTGCCACCACCTGAGCCTAAGCCTGAGCCTAAGCATAAGCATCAGCTTCGCAGAACTAGTTCAGCCATCTTTTGA 984 0.5071 MGSQGGALQKPKTTTTTPLARQGSLYNLTLDEVHNQLGDLGKPLGSMNLDELLKSVWSAEAGGEASGFDFGVGVGGGGDGDASGSSLNPQGSLTLSRGLSNKTVDEVWRDMQLKKGTDRVKKIQRQRQPTTLGEMTLEDFLVKAGVVTEALPTKGVDLNGGPSSQNGGHWMRYQFPSTAQQQPDSMMGGYVAGHALQQPPFQVAVNLVLDASAYSEPPCSLIGGALLDTQTPDGRKRLAPGGDVVEKTVERRQKRMIKNRESAARSRARRQAYTQELEIKVSRLEEENERLRRLNKMEKALPSVPPPEPKPEPKHKHQLRRTSSAIF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1270 327 Coils Coil 270 301 - -
Aed3g1270 327 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Aed3g1270 327 Pfam bZIP transcription factor 251 295 IPR004827 GO:0003700|GO:0006355
Aed3g1270 327 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 325 IPR043452 GO:0003700|GO:0045893
Aed3g1270 327 SMART brlzneu 247 315 IPR004827 GO:0003700|GO:0006355
Aed3g1270 327 SUPERFAMILY Leucine zipper domain 251 296 IPR046347 GO:0003700|GO:0006355
Aed3g1270 327 Gene3D - 249 302 - -
Aed3g1270 327 MobiDBLite consensus disorder prediction 295 327 - -
Aed3g1270 327 MobiDBLite consensus disorder prediction 1 22 - -
Aed3g1270 327 PANTHER BZIP TRANSCRIPTION FACTOR 2 325 - -
Aed3g1270 327 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 293 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1270 Aed-Chr3 11885910 11891256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1270 1 327 bZIP Transcription Factor Family AT3G56850 54.094 2.49e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed3g1270 bZIP_1 3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1270 K14432 - gmx:100170741 396.356