Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1267 ATGAAACCTCTGCCGGGAGCAGTCAAATGGGTGCAACCTTCAACAAGAAGAGAAGGGTATACTGCTGTTCCTGATGTAAAATGGGAAGATATTGGGGGACTTGATCTCTTAAGACATGAGTTTGATGACTATATCATAAGGCCCATAAAATATCCTGAGGATTATGAGGTGTTGGCAGTGTTGAGGTGGCCAGACACCATTATAGACACCATTGCCTGTTTTCTCTCTTCAAATTTGTCTATTGTCATAGGATTTGGGGTAGATCTTACGACGGGATTCTTGCTGTATGGACCTCCAGGACCTGAACTTCTAAGGTCATATGTTGGAGAAAGTGAGCATGAAATTCAGAAATTGTTCAATGAGGCAAAGGCATGTGTGCCTTGCATACTCTTTTTTGATGAGGTGGATGCGTTGACAACCAAGCGTGGTAGAGAAGGTGGATGGGTCACTGAACGATTATTGAACCAATTGCTTCTAAAGTTAGATGGTGCAGATGAACGGAGAGATGTTTTTGTGATCACTGCAACAAACAGGCCTGATGTTATTGATCCTGCTCTTCTACAGCCTGGTAGGTTTGGTAGACTTCTTTACGTTCCTCTCCCAAGTCTAGAACAGCGGGTTTTGATATTGAAAACTCTTTCAAGAAAGCATCGTGTTCATGCCAGTACAGATTTGAGCACCTTGGGAAGATCGAAAGCTTGTGAAAATATGAGTGATGCCGATCTTGCTTTATTGATGGCAGAAGCAGAAATGACTGTTGTTAGAGGGGAGGGGCCCAAAACTAATGATGGTATCAAGCCATGTCATGTTGAAGTAGCACTATCTAGAGTCTTTCCCTCTGTGTCTGAAAAGAGAAAATCTTTGTACTTTCTAGGTATCTATATATTCACATTTGCTATCGCATTTTACTTTGTATAA 918 0.4172 MKPLPGAVKWVQPSTRREGYTAVPDVKWEDIGGLDLLRHEFDDYIIRPIKYPEDYEVLAVLRWPDTIIDTIACFLSSNLSIVIGFGVDLTTGFLLYGPPGPELLRSYVGESEHEIQKLFNEAKACVPCILFFDEVDALTTKRGREGGWVTERLLNQLLLKLDGADERRDVFVITATNRPDVIDPALLQPGRFGRLLYVPLPSLEQRVLILKTLSRKHRVHASTDLSTLGRSKACENMSDADLALLMAEAEMTVVRGEGPKTNDGIKPCHVEVALSRVFPSVSEKRKSLYFLGIYIFTFAIAFYFV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1267 305 CDD AAA 92 200 - -
Aed3g1267 305 Gene3D - 8 100 IPR027417 -
Aed3g1267 305 Gene3D - 101 285 IPR027417 -
Aed3g1267 305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 283 IPR027417 -
Aed3g1267 305 Gene3D - 201 275 - -
Aed3g1267 305 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 7 287 - -
Aed3g1267 305 Pfam ATPase family associated with various cellular activities (AAA) 100 199 IPR003959 GO:0005524|GO:0016887
Aed3g1267 305 PANTHER AAA-FAMILY ATPASE 7 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1267 Aed-Chr3 11788859 11792051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1267 6 280 Calmodulin-binding Proteins AT3G56690 35.740 3.97e-41 150