Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1262 ATGGATAATTTTAGGGATGAACAGTTTGTTAATTTGGATGATGAAAATGATGTTAGTTCTAGCAACACAAATAGTTCCAGTGAAAGTGACAGTGAAGTGGATATAGATGTTAACAATGAAGAAGAGGTTGAAGATGTTGATTTCAAGTACAAAAATGTAAAGAATTTCACAACATATGACATTATCCCCTTAAAGTGGTTATGTGAAAATGATGGATATAAATTTTATACTTCTTATGCCAAATCAAATGGCTTTGGGATTATAAAAGATGAGCATTTGATGAGGGATAACAGGAAAAAGGATCACCAACTCTTAAGTCATACAAATTGCAAAACTAAGCTACGTATAAAGATGGATAGAAATACATCTAAATGGATAGTTGTGTCTTTTGAGGAAGGTCATAACCATGAATTATGTTGTTCAAACTATGTGCCATTAATACGAACATACTGTGGCTTGTTTGATGCTGACAAAGCTCAGGTGGATTCGTTGCATGCCCAAGGTGTTAAAGCATGTTAG 519 0.3353 MDNFRDEQFVNLDDENDVSSSNTNSSSESDSEVDIDVNNEEEVEDVDFKYKNVKNFTTYDIIPLKWLCENDGYKFYTSYAKSNGFGIIKDEHLMRDNRKKDHQLLSHTNCKTKLRIKMDRNTSKWIVVSFEEGHNHELCCSNYVPLIRTYCGLFDADKAQVDSLHAQGVKAC 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1262 172 Pfam FAR1 DNA-binding domain 97 138 IPR004330 -
Aed3g1262 172 MobiDBLite consensus disorder prediction 14 32 - -
Aed3g1262 172 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1262 Aed-Chr3 11494838 11495441 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed3g1262 FAR1 5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1262 - - ccaj:109794460 179.489