Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed3g1239 | ATGTATGACAGTGATAATCATGATCAGATAATTGGAAGCATTGGAGCTGTAGCTGCAGGCTTAGATTTAGGAAAAGAAGGGCCATTGGTACACATTGGAAGCTGCATTGCTTCCATACTAGGCCAAGGAGGCCCTGACAATTACAGGATCAAATGGCGATGGATTCGGTATTTCAACAACGACCGCGACCGTCGCGATCTCATCACCTGCGGCGCCTCCTCAGGGGTTTGTGCAGCCTTCAGGGCACCTGTGGGAGGAGTTCTCTTTGCTCTTGAGGAGGTTGCAACTTGGTGGAGAAGTGCTCTTCTCTGGAGAACATTTTTCAGTACTGCTGTGGTTGTGGTGGTGCTGAGGGCCACTATTGAACTTTGCCACAAGGGGAAGTGTGGCCTTTTTGGTGAAGGAGGACTCATCATGTTTGATGTGAGTGATGTTACTGTGAGGTACAATGTGATGGATATTATCCCTGTTGTTATCATTGGAGTTCTTGGTGGGGTTTTGGGAAGCCTTTACAACTATCTTCTCCATAAGCTCCTCCTGAGTCTCTCAGTTGCAATCTTCACATCAGTGTGCCAATATGGCCTCCCATTCCTTGCAAAATGCACCCCTTGTGATCCCTCCTTCCCAGATGTCTGCCCCACGAACGGCCGCGCTGGAAACTTCAAACAATTCAACTGTCCAAACGGCCACTACAACGATCTTGCCACTCTTCTCCTCACCACCAACGATGATGCAGTGAGAAACATCTTCTCAACCAACACCCCTCTTGAATACCAACCCTCCTCCATCATAATCTTCTTTGCACTCTATTGTATACTAGGCCTAATCACCTTTGGCATTGCAGTGCCATCAGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGGCTACGGCCGCCTCCTTGGGATCCTAATGAGGCCCCACACCAACATTGATCAAGGACTCTTTGCAGTTCTTGGTGCAGCCTCACTCATGGCTGGTTCAATGAGAATGACAGTGTCACTTTGTGTGATCTTCCTTGAACTAACAAACAACCTTTTACTTCTACCAATAACAATGATTGTTCTCCTCATAGGCAAAACTGTTGGAGACAGCTTCAACCCAAGCATCTATGAGATCATCCTCCACCTCAAGGGCCTTCCTTTTATGGATGCAAACCCTGAGCCATGGATGAGAAACCTCACTGTGGGAGAGCTTGTTGATGTGAAGCCATCAGTGGTTGGCTTCAGAGGAGTTGAGAAAGTTGCCAACATTGTCAATGCCTTGAGGAACACTACACATAATGGTTTTCCTGTGATGGATTGTGGAGTGGTGGTGGCTAATGAGTCAATAGAACTTCATGGACTCATTTTGAGAGCACACCTTATCCAAGTGTTGAAGAAGAAGTGGTTCTTGAAGGAGAGAAGGAGAACTGAGGAGTGGGAAGTCAGGGAGAAGTTTACATGGGTGGAGCTTGCTGAGAGAGAAGGGAACATTGAAGATGTGCCTGTGACTAAAGAGGAGATGGAGATGTTTGTTGATCTTCATCCTCTCACCAATACGACGCCGTTTACAGTGTTAGAGAGGTTTGGTGTTCTCGCTCCTCTCTTTGGCCTCCAACTTCCCATGGCCTACCATGGAATTACCTTAGACCACCGCCCCTGGCTGTTGTCCCTTCCGATGTTGCCACACTTGCATGTTTCCAAGACGCCGCGCAATTGCACGCCGCTACCTTATAGTGCGTCGCCGCACAATTGCACTTCGTCGATTTGTAGTGTGCCGCCATGGAGTAGACAAATACTACCACCTTCGTGTTAG | 1797 | 0.483 | MYDSDNHDQIIGSIGAVAAGLDLGKEGPLVHIGSCIASILGQGGPDNYRIKWRWIRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRATIELCHKGKCGLFGEGGLIMFDVSDVTVRYNVMDIIPVVIIGVLGGVLGSLYNYLLHKLLLSLSVAIFTSVCQYGLPFLAKCTPCDPSFPDVCPTNGRAGNFKQFNCPNGHYNDLATLLLTTNDDAVRNIFSTNTPLEYQPSSIIIFFALYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGILMRPHTNIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIGKTVGDSFNPSIYEIILHLKGLPFMDANPEPWMRNLTVGELVDVKPSVVGFRGVEKVANIVNALRNTTHNGFPVMDCGVVVANESIELHGLILRAHLIQVLKKKWFLKERRRTEEWEVREKFTWVELAEREGNIEDVPVTKEEMEMFVDLHPLTNTTPFTVLERFGVLAPLFGLQLPMAYHGITLDHRPWLLSLPMLPHLHVSKTPRNCTPLPYSASPHNCTSSICSVPPWSRQILPPSC | 598 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed3g1239 | 598 | SUPERFAMILY | CBS-domain pair | 387 | 523 | IPR046342 | - | |
Aed3g1239 | 598 | Gene3D | Clc chloride channel | 9 | 385 | - | - | |
Aed3g1239 | 598 | PANTHER | CHLORIDE CHANNEL PROTEIN | 9 | 525 | - | - | |
Aed3g1239 | 598 | Pfam | Voltage gated chloride channel | 9 | 363 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Aed3g1239 | 598 | SUPERFAMILY | Clc chloride channel | 10 | 385 | IPR014743 | - | |
Aed3g1239 | 598 | PRINTS | Chloride channel signature | 73 | 92 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Aed3g1239 | 598 | PRINTS | Chloride channel signature | 282 | 302 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Aed3g1239 | 598 | PRINTS | Chloride channel signature | 332 | 351 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Aed3g1239 | 598 | PRINTS | Chloride channel signature | 9 | 28 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Aed3g1239 | 598 | PRINTS | Chloride channel signature | 314 | 330 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Aed3g1239 | 598 | PRINTS | Chloride channel signature | 370 | 384 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Aed3g1239 | 598 | PRINTS | Plant CLC chloride channel signature | 94 | 102 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Aed3g1239 | 598 | PRINTS | Plant CLC chloride channel signature | 126 | 133 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Aed3g1239 | 598 | PRINTS | Plant CLC chloride channel signature | 108 | 118 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Aed3g1239 | 598 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 9 | 525 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed3g1239 | Aed-Chr3 | 11002112 | 11007028 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed3g1239 | 9 | 529 | Ion Channels | AT5G40890 | 77.467 | 0.0 | 831 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed3g1239 | K05016 | - | gmx:778094 | 915.605 |