Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1221 ATGAGACATTTTTGTCACCTTTACCTTGTGGTTCTTTCATGGTATTTGTTCATCCCCAACACTCATGAATTGCAAGCAGCTCAGACTCAAGCCTTGTTGCAGTTAAGAGTTTATCTAGAGTACCCCTCTTCTCTGCAAATTTGGGAAAGTTACAATTGGGACCTATGCACCCTTTCCCCCTCTGCAAACCTAAGCATTAAATGTGAAAATGATGAGGTAACTGAGCTTAAAATCATGGGTGAAAAGTCTGAGAAGCCACAACGGTTCAATGGATTTGCAGTTCCTAATCAGACACTATCCATGAATTTCTCAATTGATTCATTTTTCACCACTTTGACAACAAGGTTGACAAGCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGATTTGGGGGCCACTCCCTGATGAGATTCACAGTTTCTCTTTGCTTCAAGTTTTGGACTTGAGCTCCAATTTCTTATTTGGAGCCATCCCACCAAAAATATCCACAATGGTAAAGCTTCATGCACTGACCCTTGATGAGAACTATTTCAACACCACTGTGCCTGATTGCTTTGATTCCTTGTCTAATCTAAACATCTTGAGTGTGAAGAGCAATGGTTTAAAGGGTTCATTCCCCTCCTCACTGTGCAAAGTTAACACACTTGTAGTTATTTCCTTGTCCCACAATGAGTTGTGTGGTGAGTTACCTGATCTTGATTCTCTCACTGGCCTACATGTTCTTGATTTAAGAGAGAACCATTTAGAATCTGAACTACCATTGTTGCCTAAATCAGTGGTCACAGTTTTGCTTAGCAATAACTCATTCTCAGGAGAGATACCTAAGCAGTTTGGTGAACTAAATCAGCTTCAACATCTAGATCTGTCTTCAAATCATCTCACTAAGACACCCCCACCTACCCTTTTCTCTCTGCCAAAAATGAGTTATTTGAATCTGGCAAACAATGTGCTAAGTGGGGCCCTTCCAGAAAAACTTAGCTGTGGGAGCAAACTTGGGTTTGTGGACATTTCTAGCAACAAGTTAAGTGGTGGAGTTCCTTCTTGCTTGGCAAATGCTTCTGATGGTAGAGTTGTCAGATATGCTGGAAACTGTTTATCTGTTGTTGATCATTCTCAGAACCAGCATAGAGGAGGGTCTTATTGTAGAGAATCTAGCTCTGGATGGAAGAGCTTTAAGCCATGGAAAGTAGCTGCTGCAATGGCCATCATCATTGTTCTTGGACTTGTTCTTGTGGTTTTGGTGGCTGGAGTCTTCTGGTGGAGAAAATATCATTCCAGAAAGACAACTGGGCAGGAAGTGTTGCTGAAAATTGTTCATGATAACTCCACAACTGGGGTTTCATCAGAGATCCTTGCAAATGCAAGATTCATTTCTCAAACAGTGAAGCTAGGGACACAAACCACTTCAACCTGTAGACAAATTTCAATTGAAGAACTGAAGGAAGCCACAAAAAACTTTGACTTGTCAACTTATATTGGTCAAGGCTCCATAGGGAAGCTGTTCAAAGGTAAACTAGAGAATGGATCCTACGTGGTGATACGATCTTTGCCTCTGTCAAAGAAATGCTCAATTCAAAATCTCAGAGCTAAGTTGGATTTACTCTCAAAGCTTCAATATCCAAATTTGGTCAGCCTTTTGGGCCATTGTATTGATGGTGGTGGACAAGATGATTCAAATTCTCTCAAACTTCATCTTGTATATGAGTATGTGCCAAATGGGAATTATCGTACACATTTGTCAGAATTTTCTGTAAGTAAGGCACTCAAGTGGTCTGATAGATTGGCAATTTTGATTGGAGTTGCAAAGGCAGTGCATTTCTTACATACTGGTGTCATACCTGGTTGTTTTAGTAACCAACTAAAGACAAAGAATGTCTTACTTGATGAACACCGCATTCCAAAACTGAGTGACTATGGAATCCCAAGAACAAAAGCAGAGGACGATGTTTATAATTTTGGATTCATATTGTTTGAGTCACTTGTTGGACCCATAGCATGCGACAAAGGTGAAACATTTTTTCTTAATGAAAAGGCATCTTTTGGCAGTCAAGATGGTAGAAGAAAAATTGTGGATCCTATTGTGTTGACCACTTGCTCTCAAGAGTCACTATCAATTGCAATCTCAATAACAACCAAATGCATATCTCCAGAATCTTCAATTCGTCCCTCTTTTGAGGATGTCCTATGGAACTTACAGTATGCAGCACAAGTCCAAGCCACAGCAGATGCAGACCACAAATCGGATTAA 2247 0.4041 MRHFCHLYLVVLSWYLFIPNTHELQAAQTQALLQLRVYLEYPSSLQIWESYNWDLCTLSPSANLSIKCENDEVTELKIMGEKSEKPQRFNGFAVPNQTLSMNFSIDSFFTTLTTRLTSLRVLSLVSLGIWGPLPDEIHSFSLLQVLDLSSNFLFGAIPPKISTMVKLHALTLDENYFNTTVPDCFDSLSNLNILSVKSNGLKGSFPSSLCKVNTLVVISLSHNELCGELPDLDSLTGLHVLDLRENHLESELPLLPKSVVTVLLSNNSFSGEIPKQFGELNQLQHLDLSSNHLTKTPPPTLFSLPKMSYLNLANNVLSGALPEKLSCGSKLGFVDISSNKLSGGVPSCLANASDGRVVRYAGNCLSVVDHSQNQHRGGSYCRESSSGWKSFKPWKVAAAMAIIIVLGLVLVVLVAGVFWWRKYHSRKTTGQEVLLKIVHDNSTTGVSSEILANARFISQTVKLGTQTTSTCRQISIEELKEATKNFDLSTYIGQGSIGKLFKGKLENGSYVVIRSLPLSKKCSIQNLRAKLDLLSKLQYPNLVSLLGHCIDGGGQDDSNSLKLHLVYEYVPNGNYRTHLSEFSVSKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNQLKTKNVLLDEHRIPKLSDYGIPRTKAEDDVYNFGFILFESLVGPIACDKGETFFLNEKASFGSQDGRRKIVDPIVLTTCSQESLSIAISITTKCISPESSIRPSFEDVLWNLQYAAQVQATADADHKSD 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1221 748 SUPERFAMILY L domain-like 113 365 - -
Aed3g1221 748 Gene3D Ribonuclease Inhibitor 256 386 IPR032675 -
Aed3g1221 748 PANTHER OS07G0166700 PROTEIN 2 748 IPR045272 GO:0004714|GO:0006468
Aed3g1221 748 Gene3D Ribonuclease Inhibitor 26 161 IPR032675 -
Aed3g1221 748 ProSiteProfiles Protein kinase domain profile. 486 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1221 748 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 2 748 - -
Aed3g1221 748 Pfam Leucine rich repeat 260 317 IPR001611 GO:0005515
Aed3g1221 748 ProSiteProfiles Leucine-rich repeat profile. 282 303 IPR001611 GO:0005515
Aed3g1221 748 Gene3D Phosphorylase Kinase; domain 1 430 569 - -
Aed3g1221 748 Gene3D Ribonuclease Inhibitor 162 255 IPR032675 -
Aed3g1221 748 Gene3D Transferase(Phosphotransferase) domain 1 570 644 - -
Aed3g1221 748 Gene3D Transferase(Phosphotransferase) domain 1 645 748 - -
Aed3g1221 748 SUPERFAMILY Protein kinase-like (PK-like) 467 731 IPR011009 -
Aed3g1221 748 Pfam Protein tyrosine and serine/threonine kinase 488 650 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1221 Aed-Chr3 10727448 10734512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1221 7 676 Miscellaneous Gene Families AT5G14210 54.663 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Aed3g1221 PK_Tyr_Ser-Thr 1.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1221 - - gmx:100780663 1283.47