Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1215 ATGCTTAGCCATGCATATGCAGCAGCAATCACAACAGTACTATTCTGCATGCTATACTGGTTCCATCGGAGAAGAAGTTGCAGAAACCCTGTCTTCAATGACTACCCCATCGTTGGCATGCTACCATCCGTGCTCAGCAACATATGGCGTGTCCATGATATTTCATTTGACCTAATGAAAGCAAATGGAGGCACTGGTGAGTTCACTGGACCCTGGTTTACCAACATGAACTATTTGATCACCAGTGACCCTCTCAACGTGCACCACATCTTGAGCAAGAATTTCCACAACTACATCAAGGGACCCCAGTTTCGTGACATTTTTTTTCAAACCTTTGGAGACGGGATGTTAACCACTGATTCTGAGGTTTGGAAATACAACAGGGATCTCATCCATCCTCTTTTTAAGAACAGAACCTTTGAGGCTTTTCTTGAGAAAACAATTCACAACAAGGTTCAGAATAGCCTCCTTCCAATGTTGAATCATCTGCAAGGGAAGCTGGTTGTGGATCTTCAAGATGTCTTCGGTCGCTTTACTTTCGACAACATATGTTCTATACTTCTTGGATATGACCCCATACCTACGTTTGTTTGGAAGTTGCAGAGATGGCTTCAAATTGGTCATGAGAAGAAGATGACTGAAGCATGTGAAACACTCGATCAATTCATATATGGATGCATAGAGTCTAAGCGGAAAGAGCTAAGCAATTATAAGCCCAGCGAAAATGAAACGGTGGACTTGCTCACGGCTTTGATGAGAGAAAAACAAATACATCATGACGATAAATTTCTACGAGATGCTGTGTTCAATCTCTTTGTGGCTGGGAGAGATACCATAAGTTCAGCTCTCACGTGGTTCTTTTGGCTTGTTGCTACAAACCCTTCTGTGGAAGCCAAGATTCTTCAAGAGATCAAAGAGAATTTTGGAACTACTACTACTCTTGGGGGGGTTTTAAGTGTGGAAGAGGTGAAAAAGCTAGTTTATCTGCATGGTGCTATAAGCGAAGCATTGAGGCTCTTTCCTCCTATATCTTTTGAGCGCAAGGAAGCGTTAAAAGCTGACATGCTTCCTAGTGGTCATCGTGTTAATCCCAATACGACGATAATATTTGCATTCTATGCAATGGGAAGATTTGAAGAAATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATCTCAGAGAAAGGAGGTATTGTATTTCAACCAGCATTCAAATTCGTTGCTTTTAATGCAGGACCTAGGACTTGCTTGGGAAAAGACTTGTCCTTCATTCAAATTAAGATGGTAGCAGCTGCTATTTTGAGCAATTACAGTGTCCAAGTGGTGGAAGGTTATGTTCCTATCCCAAGCATTTCCATTGTTCTTCTCATGAAGGATGGTTTGAAGGTTAAGATAACAAAAAGAAAAATTTAG 1422 0.4149 MLSHAYAAAITTVLFCMLYWFHRRRSCRNPVFNDYPIVGMLPSVLSNIWRVHDISFDLMKANGGTGEFTGPWFTNMNYLITSDPLNVHHILSKNFHNYIKGPQFRDIFFQTFGDGMLTTDSEVWKYNRDLIHPLFKNRTFEAFLEKTIHNKVQNSLLPMLNHLQGKLVVDLQDVFGRFTFDNICSILLGYDPIPTFVWKLQRWLQIGHEKKMTEACETLDQFIYGCIESKRKELSNYKPSENETVDLLTALMREKQIHHDDKFLRDAVFNLFVAGRDTISSALTWFFWLVATNPSVEAKILQEIKENFGTTTTLGGVLSVEEVKKLVYLHGAISEALRLFPPISFERKEALKADMLPSGHRVNPNTTIIFAFYAMGRFEEIWGKDCLEFKPERWISEKGGIVFQPAFKFVAFNAGPRTCLGKDLSFIQIKMVAAAILSNYSVQVVEGYVPIPSISIVLLMKDGLKVKITKRKI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1215 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Aed3g1215 473 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PANTHER CYTOCHROME P450 FAMILY PROTEIN 193 471 - -
Aed3g1215 473 SUPERFAMILY Cytochrome P450 35 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PANTHER CYTOCHROME P450 7 192 - -
Aed3g1215 473 Pfam Cytochrome P450 37 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 Pfam Cytochrome P450 198 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 192 - -
Aed3g1215 473 Gene3D Cytochrome P450 22 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1215 473 PANTHER CYTOCHROME P450 193 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1215 Aed-Chr3 10678090 10680155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1215 10 471 Cytochrome P450 AT4G32170 42.914 5.02e-145 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1215 - - gmx:100781709 707.983