Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1212 ATGGATGAGAAATCAAGAATTATTAGTTCACCCGATATAGACCCAAAAAGTGGCTTCAACCGTGCTTCCAGAACCTTCCACAGCCTCACGCCGCCACCAAAACTCCCTCCCTCGAACGCCACCGTCTCCGTCGCAACCTGTGTCTTCTCCCTCCGCCACAATTCACCGTTTCCGGACTCCACCACCGCCTTCATCGACGCCGCCACCGGCCACGGCCTCTCCCACGGCGAGGTCATCCACCGCGCTGAAATCCTAGCTTCCAATCTCACCACAGTCCTCAAACTCTCCAAAGGCGACACCGCGCTGGTTCTCTCCCCAAACCTAATCCAAGTTCCGATCCTCTACTTCGCACTTCTTTCTCTCGGCGTGGTCGTCTCCCCCGCGAACCCTCTCTCCACGCGCTCCGAGCTCACGCGCCTCTTCCACCTCAGCAAACCCGCAATCGTCTTCACAGTAACTTCCGTCGTTGAAAAAACACGCGAGTTTCGTGTCCGAGCCGTCCTCCTCGACTCGCCCGAGTTCGACTCGCTCACGAAGATTACCCAGATTCAGACACCGAGTCCACTCGTATCCACTGCGCGGGTGACTCAGTCCGACGTGGCAGCGATTCTCTACTCCTCCGGCACCACGGGGATGGTGAAGGGCGTGATGCTCACGCACCGTAACTTAACGGCGTTGGCTGCAGTATACGACGCCGTTCGCGTAAAGAGAAAGTTCCCCGCGGTGTTCGTCTACACGATGTCATTTTTCCATGTGTACGGATTCACATTCTGCTTAAGAGCGATGGTGCTGTCGGAGACGGTGGTAATAATGGAGAGGTTCAGTTTGAGGGGGATGCTGAGCGCCGTGGAGAGGTTCCGAGTGACGCACCTCGCGGTGGTGCCGTCGCTGATGGTGGCCTTGACGAAAGACAGCGTCACCGACGGGTACGATTTGAGGACGTTGGAAGGAGTGGCGTGCGGTACGGCTCCACTGGGAAAGGAAATCGCCGAGGCTTTCAAAGCCAAGTTCCCCAACGTCGTCATCATCCAGGGATATGGTCTAACCGAGTCAACTGCTGGGGTTGCCCGAATCTCTTCAGAGGAGGTTAATCATCAGGCGGGAACAACAACAGGTAGACTGGTATCAGGAGTGGAAGCCAAAATTGTGAACCCAAACACCGGAGAAGCCATGTTTGCCGGTGAACAAGGAGAACTTTGGATAAAATCACCTTCAATTATGAAAGGTTATGTTGGTGACCCTGAAGCAACTTCAGCAATTTTGGTGGATGGGTGGTTAAGAACTGGGGATCTCTGTTATTTTGATAGCGAAGGTTTCTTGTATGTTGTTGATAGATTGAAAGAGTTGATCAAATACAATGGCTACCAGATAAATGATGCTGCAGTTATTCCATACCCTGATGAAGAAGCTGGCCAAGTGCCCATGGCCTTTGTGGTAAGACAATCTCAAAGTTCCCTTGGTGAAGCAGAAATAATTGATTTTGTGGCCAAACAGGTTGCACCATACAAGAAAATAAGGCGTGTAGCATTCGTTGATTCAATACCAAAGAATGCTGCAGGAAAGATACTGAGGAAGGACTTAATTAAACTTGCTCTCTCTAGGTTATAA 1608 0.5193 MDEKSRIISSPDIDPKSGFNRASRTFHSLTPPPKLPPSNATVSVATCVFSLRHNSPFPDSTTAFIDAATGHGLSHGEVIHRAEILASNLTTVLKLSKGDTALVLSPNLIQVPILYFALLSLGVVVSPANPLSTRSELTRLFHLSKPAIVFTVTSVVEKTREFRVRAVLLDSPEFDSLTKITQIQTPSPLVSTARVTQSDVAAILYSSGTTGMVKGVMLTHRNLTALAAVYDAVRVKRKFPAVFVYTMSFFHVYGFTFCLRAMVLSETVVIMERFSLRGMLSAVERFRVTHLAVVPSLMVALTKDSVTDGYDLRTLEGVACGTAPLGKEIAEAFKAKFPNVVIIQGYGLTESTAGVARISSEEVNHQAGTTTGRLVSGVEAKIVNPNTGEAMFAGEQGELWIKSPSIMKGYVGDPEATSAILVDGWLRTGDLCYFDSEGFLYVVDRLKELIKYNGYQINDAAVIPYPDEEAGQVPMAFVVRQSQSSLGEAEIIDFVAKQVAPYKKIRRVAFVDSIPKNAAGKILRKDLIKLALSRL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1212 535 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 14 529 - -
Aed3g1212 535 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Aed3g1212 535 CDD 4CL 36 527 - -
Aed3g1212 535 SUPERFAMILY Acetyl-CoA synthetase-like 59 533 - -
Aed3g1212 535 Gene3D - 33 447 IPR042099 -
Aed3g1212 535 MobiDBLite consensus disorder prediction 1 33 - -
Aed3g1212 535 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 529 - -
Aed3g1212 535 Pfam AMP-binding enzyme 60 452 IPR000873 -
Aed3g1212 535 Pfam AMP-binding enzyme C-terminal domain 457 521 IPR025110 -
Aed3g1212 535 Gene3D - 448 533 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1212 Aed-Chr3 10639049 10647979 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1212 13 532 Monolignol Biosynthesis Gene Families AT5G63380 47.559 4.77e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1212 - - gmx:100801143 832.017