Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1210 ATGGATGAGAGAGCAAGAATAAGCTCACCGGATATAGACCCAAGGAGCGGTTTTCATCACGCTTCCAGAACCTTCCACAGCCTCAAGCTACCACTCCTCCTCCCTCCTCCCAACGCCACCGTCTCCGCCGCAAGCTACGCCTTCTCCCTCCGCGATAATTCGCCGTTTCCGGACTCCGTCACGGCCTTCATCGACGCCGCCACCGGCCACGGCCTCTCCTACGGCAAGCTCATCCACCGCGCTGAAACTCTAGCTTCCAATCTCACCACAGTCCTCAAACTCTCCAAAGGCGACACCGCGCTCGTTCTCTCCCCAAATCTAATCCAAGCTCCGATCCTTTGCTTCGCACTCCTTTCTCTCGGCGTGGTCGTCTCTCCCGCGAATCCTCTCTCCACGCGCTCGGATCTCACGCGCCTCATCCACCTCAGCAAACCCGCAATCGTCTTCACACTAACTTCCGTCGTTGAAAAAACACGCGAGTTTCATGTCCGTACAGTCCTCCTCGACTCGCCCGATTTGACTCGCTCACGAAGATGA 537 0.5717 MDERARISSPDIDPRSGFHHASRTFHSLKLPLLLPPPNATVSAASYAFSLRDNSPFPDSVTAFIDAATGHGLSYGKLIHRAETLASNLTTVLKLSKGDTALVLSPNLIQAPILCFALLSLGVVVSPANPLSTRSDLTRLIHLSKPAIVFTLTSVVEKTREFHVRTVLLDSPDLTRSRR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1210 178 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 12 173 - -
Aed3g1210 178 Pfam AMP-binding enzyme 60 157 IPR000873 -
Aed3g1210 178 Gene3D - 33 177 IPR042099 -
Aed3g1210 178 SUPERFAMILY Acetyl-CoA synthetase-like 60 171 - -
Aed3g1210 178 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1210 Aed-Chr3 10630266 10630802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1210 12 175 Monolignol Biosynthesis Gene Families AT1G20490 36.585 1.25e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1210 - K01904 gmx:100784234 255.758