Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1209 ATGGAGCAGAGAACCAGCACATGCTCACCGGTCACAGATCCAAGGAGCGGTTTCAACCGCGATTCCAGAACCTTCCACAGCCTCAAGCCACCGCTCCGCCTCCCTCCTCCAAACGCCGCCGTCTCCGCCGCCTCCTTCGCCCTCTCCCTCCGCCGCAACTCGCAGTTCCCGGACTCCTTCACCGCCATTATTGACTCCGCCACCGGCCACCGCATCTCCTACGGCGAGCTCATCCACCGCTCCGAAACCCTAACCTCGAATCTCAGCAGTGTTCTCAAACTCATCAAAGGCGACACCGCGCTCGTTCTCTCGCCGAACCTAATCCAAGTTCCGATCCTCTGGTTCGCGCTTCTCTCCCTCGGCGTGGTCGTCTCCCCTGCGAACCCTCTCTCCACGCGCCATGAGCTCACGCGCTTCTTCAACATCAGCAACCCCGCTGTTGTTTTCACAGTCACCTCCGTCGTTGAAAAAACACGCGAGTTCAACGTCCAAACCGTCCTACTCGACTCGCCCGAGTTCGACTCGCTCACGAGGACTCCTCAGACTCAGACTCAGACACAGAGTGGACTCGTTTCCCAGTCTGACGTGGCAGCGATTCTATACTCCTCGGGAACCACGGGAACAATAAAAGGTGTGATGCTCACGCACCGTAACTTAACTGCCATCGCTGCGGGATACGACACCGTTCGCGAGAAGAGGAAGGACCCCGCGGTGGTGCTCAATACGGTGCCGTTTTTCCACGTGTACGGGTTCACGTTCAGTTTGGGAGCGTTGGTGTTGTCGGAGACGGTGGTGATAATGGAGAGGTTCGGTTTGAAGACGATGCTGGGCGCCGTGGAGAGGCTGCGGGTGACGCACGTCACGGTGGTGCCGGCGCTGGTAGTGGCTGTCACGAAGAACTGCGTCACCGACGGGTACGATTTGACGTCACTGGAAGGGATCGTTTGCGGTGGATCTCCGCTGAGGAAGGAAACCGATGAGGCTTTCAAAGCCAAGTTCCCTAACGTCCTCGTCATGCAGGGATACGGTTTAACTGAATCTGCAGTTACTCGAACCACTCCAGAGGAGGCTAATCAGGTGGGAGCAACAGGTAGACTGATACCAAATATAGAAGCCAAAATTGTGAACCCAGAAACAGGAAAAGCCATGTTTCCTGGTGAACAAGGTGAACTCTGGATCAAAGGACCTTATGTTATGAAAGGTTATGCCGGTGACCCAAAAGCAACTTCAACAACTTTGGTTGATGGGTGGTTAAGGACAGGAGATCTTTGTTATTTCAATAATGATGGTTTCTTATATGTTGTAGATAGGTTGAAAGAGTTGATCAAATACAAGAGCTACCAGGTTGCTCCGGCAGAGTTAGAAGAGTTACTCCTATCTCATCCAAAGATAAATGATGCTGCAGTTATTCCATACCCCGATGAAGTAGCAGGCCAAGTACCCATGGCGTTTGTGGTAAGACAACCTCAAAGTTCCCTTGGTGCAGAAGAAGTTATAGATTTTGTTGCCAAACAGGTTTCACCGTACAAGAAAATAAGGCGTGTAGCATTTGTTAATTCCATACCGAAGAATGCTGCGGGAAAGATACTGAGAAAGGACTTAAAACTTGCGCTCTCTAGATTGTAA 1626 0.5228 MEQRTSTCSPVTDPRSGFNRDSRTFHSLKPPLRLPPPNAAVSAASFALSLRRNSQFPDSFTAIIDSATGHRISYGELIHRSETLTSNLSSVLKLIKGDTALVLSPNLIQVPILWFALLSLGVVVSPANPLSTRHELTRFFNISNPAVVFTVTSVVEKTREFNVQTVLLDSPEFDSLTRTPQTQTQTQSGLVSQSDVAAILYSSGTTGTIKGVMLTHRNLTAIAAGYDTVREKRKDPAVVLNTVPFFHVYGFTFSLGALVLSETVVIMERFGLKTMLGAVERLRVTHVTVVPALVVAVTKNCVTDGYDLTSLEGIVCGGSPLRKETDEAFKAKFPNVLVMQGYGLTESAVTRTTPEEANQVGATGRLIPNIEAKIVNPETGKAMFPGEQGELWIKGPYVMKGYAGDPKATSTTLVDGWLRTGDLCYFNNDGFLYVVDRLKELIKYKSYQVAPAELEELLLSHPKINDAAVIPYPDEVAGQVPMAFVVRQPQSSLGAEEVIDFVAKQVSPYKKIRRVAFVNSIPKNAAGKILRKDLKLALSRL 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1209 541 CDD 4CL 53 534 - -
Aed3g1209 541 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 13 538 - -
Aed3g1209 541 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Aed3g1209 541 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Aed3g1209 541 Gene3D - 36 439 IPR042099 -
Aed3g1209 541 MobiDBLite consensus disorder prediction 1 22 - -
Aed3g1209 541 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 538 - -
Aed3g1209 541 SUPERFAMILY Acetyl-CoA synthetase-like 58 535 - -
Aed3g1209 541 Gene3D - 440 539 IPR045851 -
Aed3g1209 541 Pfam AMP-binding enzyme 53 444 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1209 Aed-Chr3 10585319 10597004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1209 9 534 Monolignol Biosynthesis Gene Families AT5G63380 48.629 1.72e-178 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1209 - - gmx:100784234 901.738