Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1180 ATGGAACCTCCAACAGGATTCTGGGCTTCTATATGGAACTTTGTTTGCTTTCTGCCATTTTTCGCAGGTCTTTGGCTTCTTGGCAACATCAAAGGCCACCTTTTCCTTTTACAATGGTGGAGTGAACAATGGTGCCATTTTGTGCCCCTTCATATGCTTAATAATGACAATAGGCAACTCAGCTATCATACTTTGTCTTTGGCCCATACATTGTATTTGGACATATTACTGTGTAGTAAGGATGGAGCATGGACCACTTTTACAAAGACTTTTAATATTGTCAAGGATGTGAAAAATGAATGCTATGATACTTATTTCTCAGTTATGGATGACCTGCTACTACCGAAGCATCCAGATGGGAAATATTATGAGATCAGGCTGCGATATCTTCCCGGTGCTATTGTGGCTGCGGTTCTCGGGATCATAGTTGACATGCCGGTTATATCAGCTGTTGCCATATGCAAAGGCCCTTACATGCTTTTGAAAGGGTGGAACCGTTTGTTTCATGATCTCATAGGTCGCGAAGGCCCTTTCTTGGAGACAATATGTGTGCCTTTTGCCGGCCTTGCTATTGTTCTGTGGCCACTGGCTGTTGTTGGGGCAGTTCTGGCATCTGTGTTAGCTAGTTTCTTTCTTGGTGCCTATGCAGGTCTTATTACTTATCAGGAGTCCTCTTTCATGTTTGGCCTAGGGTACATTGTTGCTGCTGTATCCCTTTATGATGAATACAGCAATGATATTCTTGAGATGAAAGAAGGATCCTGCTTCCCAAGAAACAAACTGTTGGATGGCTTGTTCAAGGAATGTCGTCAGCTCGGAGAATCACTGGTTTCTGAAGGGCGAATAACACATGAAGACATACAAGAAGCAAAATCTGGTAAAGGTGGTAGAGTCATTAGAATTGGTTTACCAGCATATTGCCTTCTCCAAGTACTCTTGCGTTCTGTAAAAGCCAATTCCACTGGTATATTGTTAAGGTTTAAGTACAAGAAGGACTCAGTGATGGAAGTGGGAGAGGGAGATTACACACACTGCAATGCCACACACCCAACACTCTTCTCCAATAGTGGCAACACAGTGTTGAAGCTGAACCACTCAGGGACCTTCTACTTCATCAGTGGTGCATCAGGGCACTGTGAGAAGGGTCAGAAGATGATTGTTAGGGTCATGGTTGACAATGATGACTCTCTTTCTCACCATGCAGAGTCTTCTGGCCACAATATTGTTGGAGTCTCTCAAATGCTCTTCCTTCAGTTTGTTTTTACATGTTTTGCTTCTTATGTAGTTTGA 1290 0.4302 MEPPTGFWASIWNFVCFLPFFAGLWLLGNIKGHLFLLQWWSEQWCHFVPLHMLNNDNRQLSYHTLSLAHTLYLDILLCSKDGAWTTFTKTFNIVKDVKNECYDTYFSVMDDLLLPKHPDGKYYEIRLRYLPGAIVAAVLGIIVDMPVISAVAICKGPYMLLKGWNRLFHDLIGREGPFLETICVPFAGLAIVLWPLAVVGAVLASVLASFFLGAYAGLITYQESSFMFGLGYIVAAVSLYDEYSNDILEMKEGSCFPRNKLLDGLFKECRQLGESLVSEGRITHEDIQEAKSGKGGRVIRIGLPAYCLLQVLLRSVKANSTGILLRFKYKKDSVMEVGEGDYTHCNATHPTLFSNSGNTVLKLNHSGTFYFISGASGHCEKGQKMIVRVMVDNDDSLSHHAESSGHNIVGVSQMLFLQFVFTCFASYVV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1180 429 SUPERFAMILY Cupredoxins 324 390 IPR008972 -
Aed3g1180 429 PANTHER TRANSMEMBRANE PROTEIN 260 326 - -
Aed3g1180 429 Gene3D - 312 396 IPR008972 -
Aed3g1180 429 Pfam Plastocyanin-like domain 321 383 IPR003245 GO:0009055
Aed3g1180 429 PANTHER MEMBRANE PROTEIN 1 35 IPR040229 -
Aed3g1180 429 PANTHER MEMBRANE PROTEIN 76 260 IPR040229 -
Aed3g1180 429 PANTHER MEMBRANE PROTEIN 260 326 IPR040229 -
Aed3g1180 429 ProSiteProfiles Phytocyanin domain profile. 325 391 IPR003245 GO:0009055
Aed3g1180 429 PANTHER TRANSMEMBRANE PROTEIN 1 35 - -
Aed3g1180 429 PANTHER TRANSMEMBRANE PROTEIN 76 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1180 Aed-Chr3 10056812 10065675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1180 322 390 Phytocyanin Superfamily AT3G18590 65.217 2.05e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1180 - - gmx:100815201 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1180 3 10056812 10065675 Aed3g1180 3 10056812 10065675 ECH