Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1168 ATGGCATTCAGCGACAAGCAAAAGCTAGAAGAAGAAGAAGAACCGTACCGAATGGAAGATGACGAAAGCGAAGAGGAAGAAGAAGAAGAACAACAAAATTGGGACGATTGGGAAGGGGAAGACGAAGACGAGGGAGAGCGAGAATCTGAATTCCAGTGTCTCTTCTGTGACTCTCGCTACAGTTCGTGCGAGAGCAGATGTTGGAGTTGTGGATTAACATGTCAGTCCAACCATGACTTGCAGAATCATTTGCATGATGTAGTTGACTTCAGTGAGATAAAGACTTTGTGGAATGATGATAGGTATTTGATACCTTTCATGCAAGATGATTCACTGTTGTACAGTTTTGGTGATTGTGACGAAGAAGGTGAAGACGAACAAATTATGCCAATTGATGAAGATCTTATAAAGGATCTAATGAGCATTGATGAGAGTATCCATGATGATCAAGATGCCGTGAAAAAAGTGGCAGTTGATGATGTCAAACATGAGATTGCTTCTATCTCTAATGGTCATTTGAACAAGGCTAGTTCTTCAAAGGAACTTATTAATGGTAAGGACTCAAGAAGACATGTTTTGTGCAGCGATAAGGATCCAGAAAAAGGACATTTGATGGTTAATTCTCAAAATCACGTTTCAAAGCATATTAAGAAGATCAATGAAGGTTATTTTGGGTCTTACAGTTCATTCGGTATCCATCGAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGCCAAGCAATTTTGAAGAATCCCTCTCTACTAAATAGTGCTGTGGTTATGGATGTAGGTTGTGGAACTGGAATTCTCAGCCTATTTTCAGCAAAAGCTGGAGCTTCGAGGGTTATAGCAGTTGAAGCTAGTGCTAAGATGGCAGCAGTGGCATCTCAGGTTGCAAAAGATAATGGTCTTTTGCTGAGTAAAAGCCAAAATGGAGTTGATGGCCTCCAAAAGGGAGTTATAGAAGTGGTTAATAGTATGGTTGAAGAGATTGATAAAACAGTTGAACTGCAACCTCACAGTGTTGATGTATTGCTAAGTGAATGGATGGGATATTGCCTGCTGTATGAATCTATGCTTGGTTCAGTGCTTTATGCACGAGATCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCCGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGTGCCACAAGTCTTCTGTTTTGGGAAAATGTGTCTGATTTTGACATGTCTTGTATTGGGAAGGAGCTTGTAGTAGATGCTGCCCAAATTCCTATAGTTGATGTTGTGGACTCTCAAGATTTAGTTACCAGTTCTGCAATTCTCCAGTCCTTTGACTTGGCAACCATGAAGCCTAATGAGGTGGATTTCACTGCAACTGCTACTTTGGAATTGAAACCAAGTGCTTCAGAAACATGCTGCTGGTGTTATGGCATTGTCCTATGGTTTGATACTGGATTTACAAGCAGATTCTGCCGAGAAACACCAGCTGTGTTATCCACATCTCCTTACACGCCAAGAACACATTGGTCACAAACAATCTTAACCTTTCGAGAACCTATTGCAATGGGATTTGGTAAAGAAAACGGGGGTAAACCAGAAGCAATCGGCACCGAGGTGTATCCTGCTGTGAAGATTGATTTACGTGTCAGCATTGTCCGTTCTACTGAGCATCGCAGCATTGACATTTCCTTAGAAGCTGCTGGTGTTGGTCCTGATGGTCAGAAACGTAGTTGGCCCGCTCAGTTTTTTAATCTTCAGTAG 1761 0.4168 MAFSDKQKLEEEEEPYRMEDDESEEEEEEEQQNWDDWEGEDEDEGERESEFQCLFCDSRYSSCESRCWSCGLTCQSNHDLQNHLHDVVDFSEIKTLWNDDRYLIPFMQDDSLLYSFGDCDEEGEDEQIMPIDEDLIKDLMSIDESIHDDQDAVKKVAVDDVKHEIASISNGHLNKASSSKELINGKDSRRHVLCSDKDPEKGHLMVNSQNHVSKHIKKINEGYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNSAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMAAVASQVAKDNGLLLSKSQNGVDGLQKGVIEVVNSMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLLFWENVSDFDMSCIGKELVVDAAQIPIVDVVDSQDLVTSSAILQSFDLATMKPNEVDFTATATLELKPSASETCCWCYGIVLWFDTGFTSRFCRETPAVLSTSPYTPRTHWSQTILTFREPIAMGFGKENGGKPEAIGTEVYPAVKIDLRVSIVRSTEHRSIDISLEAAGVGPDGQKRSWPAQFFNLQ 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1168 586 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 65 585 IPR025799 GO:0016274|GO:0018216
Aed3g1168 586 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 23 65 IPR025799 GO:0016274|GO:0018216
Aed3g1168 586 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 220 538 IPR025799 GO:0016274|GO:0018216
Aed3g1168 586 MobiDBLite consensus disorder prediction 1 43 - -
Aed3g1168 586 Pfam Methyltransferase domain 262 377 IPR041698 -
Aed3g1168 586 Gene3D - 383 582 - -
Aed3g1168 586 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 226 526 IPR029063 -
Aed3g1168 586 SUPERFAMILY beta-beta-alpha zinc fingers 30 129 IPR036236 -
Aed3g1168 586 CDD AdoMet_MTases 262 380 - -
Aed3g1168 586 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 65 585 - -
Aed3g1168 586 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 23 65 - -
Aed3g1168 586 MobiDBLite consensus disorder prediction 14 43 - -
Aed3g1168 586 Gene3D Vaccinia Virus protein VP39 212 381 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1168 Aed-Chr3 9769945 9776396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1168 22 585 C2H2 Transcription Factor Family AT3G12270 53.909 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1168 K11436 - gmx:100781879 971.459