Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1119 ATGGCGGTACCCTTGCTCACGAAGAGGATGGTGAAGGAGCACGTCAAGAGGTTCATTCGTCCCCAGAGCGATCGCAAGATCCCCCTCAGAACCAAGGGTATTGATTCCCGTGCCAGGAGAAAGTTCAAGGGATGCTCTCTGATGCCCAACATCGGTTACGGGACCGACAAGAAAACCCACCATTATCTACCAAATGGTTTCAAGAAATTTGTTGTGCACAATGCGAAAGACCTAGAACTCCTCATCATGCATAGCAGGACTTACTGTGCTGAGATTGCTCACAATGTATCCACAAGGAAGAGAAAGGACATAGTTCAGAGAGCTGCCCAGCTTGACATCTTTGTGATGAACAAAACAGCCAAACTTTGCAGCTAG 375 0.48 MAVPLLTKRMVKEHVKRFIRPQSDRKIPLRTKGIDSRARRKFKGCSLMPNIGYGTDKKTHHYLPNGFKKFVVHNAKDLELLIMHSRTYCAEIAHNVSTRKRKDIVQRAAQLDIFVMNKTAKLCS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1119 124 Pfam Ribosomal protein L32 16 117 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed3g1119 124 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 123 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed3g1119 124 SUPERFAMILY Ribosomal protein L32e 2 123 IPR036351 -
Aed3g1119 124 CDD Ribosomal_L32_L32e 16 117 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed3g1119 124 PANTHER 60S RIBOSOMAL PROTEIN L32-1 1 123 - -
Aed3g1119 124 SMART Ribosomal_L32e_2 15 117 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1119 Aed-Chr3 9173320 9176600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1119 1 124 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 70.543 4.24e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1119 K02912 - gmx:100499846 207.608