Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1118 ATGGCGGTACCCTTGCTCACCAAGAAGATCGTGAAGAAGCGCGTCAAGAGGTTCATTCGTCCCCAAAGCGATCGCAAGATCTCCGTCAAGCCAAGCTGGCGCAGACCCAAGGGTATTGATTCTCGTGTCAGGAGAAAGTTCAAGGGATGTGCTTTGATGCCCAACATCGGTTATGGGACCGACAAGAAAACCCGCCATTATCTACCAAATGGTTTCAAGAAATTTGTTGTGCACAATGTGAAAGACCTGGAACTCCTCATGATGCATAACAGGACATACTGTGCTGAGATTGCTCACAATATCTCCACAAGGAAGAGGAAGGCCATAGTTGAGAGAGCTGCACAGCTTGATGTTGTTGTGACAAACAAAACAGCCAGACTTCGCAGCCAGGAGGATGAGTAG 402 0.4826 MAVPLLTKKIVKKRVKRFIRPQSDRKISVKPSWRRPKGIDSRVRRKFKGCALMPNIGYGTDKKTRHYLPNGFKKFVVHNVKDLELLMMHNRTYCAEIAHNISTRKRKAIVERAAQLDVVVTNKTARLRSQEDE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1118 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed3g1118 133 PANTHER 60S RIBOSOMAL PROTEIN L32-1 1 133 - -
Aed3g1118 133 CDD Ribosomal_L32_L32e 18 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed3g1118 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed3g1118 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Aed3g1118 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1118 Aed-Chr3 9170915 9173223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1118 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 85.714 3.58e-86 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1118 K02912 - gmx:100306401 250.751