Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1111 ATGGCTCCCAAACAACCTGGTACGGGTTTGTTTGTTGGATTGAACAAGGGTCACGTTGTCACCAAGAAGGAGTTACCTGCACGCCCCTCAGATCGCAAGGGGAAAACAAGCAAGCGAGTGCACTTTGTGAGGAATCTCATTCGAGAGGTTGCAGGATTTGCACCTTATGAGAAGCGTATAACTGAGTTGCTTAAGGTTGGAAAAGATAAGAGGGCACTCAAGGTTGCTAAGAGAAAGCTTGGAACCCATAAACGTGCAAAGAAGAAGAGAGAAGAGATGTCTAATGTTCTCCGAAAGATGAGGGCTGGTGGAGCTGGAGACAAGAAGAAATAA 333 0.4625 MAPKQPGTGLFVGLNKGHVVTKKELPARPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1111 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Aed3g1111 110 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Aed3g1111 110 MobiDBLite consensus disorder prediction 87 110 - -
Aed3g1111 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Aed3g1111 110 MobiDBLite consensus disorder prediction 79 110 - -
Aed3g1111 110 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Aed3g1111 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1111 Aed-Chr3 9054758 9057005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1111 7 110 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 83.654 2.50e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1111 K02920 - gmx:100526979 213.772