Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1105 ATGGCTATGGTGATTCTCACAACCCTTTTGGTGGTTTTGGTGAGTGTGGTTTTGAAAGTTGCTTATGACACCTTCTCATGTTACTGGCTCACTCCAATGCGCATAAGAAAGATCATGGAGAAACAAGGTGTGCATGGCCCTAAACCCAGCTTTCTTATGGGCAACATCAAGGACATGGCATCCCTTGCTTCTAGGGCAGTTTCTCAAGACATGAAAACCATCAACCATGACATTGTTGCTCGCATTTTGCCTCATTTTGTTGCATGGTCCAACCAATATGGAAAGAGGTTCCTATATTGGAATGGAATAGAACCAAGGCTGTGCCTAACAGAAACAGCATTGATAAGAGAGTTTCTCTCAAAGCACAGTGTCATAACTGGGAAGTCATGGCAGCAACAACAGGGGAACAAACACTTCATTGGCAGAGGCTTGTTGATGGCAAATGGTGGAGATTGGCAACACCAACGCCACATGGTTGCCCCTGCATTCATGGGAGATAGACTTAAGGGCTATGCCAGGCACATGGTGGAATGCACAGAGGACATGCTCCAATCACTGCAAAATACAATAAAGGGTGGCAAAACTGAGGTGGAGATTGGAGAGTGCTTCACTGAACTCACTGCAGACATCATCTCAAGAACTGAGTTTGGTACAAGCTATCAGAAGGGAAAGCAAATATTCCATCTCCTCACTGAGCTGCAGAGCAGATACAACAGAGAGATAAAGTCTATGAAGATGGAGGTGGAGAAACTCTTGATGGAGATAATACTGAGTAGAAAAGATTGTGTTGAAATGGGGAGAACCAATTCCTATGGGAATGATTTGTTGGGCATACTCTTGGATGAGAGTGGTACCTTGAATCTACAACTAGTTATGGATGAATGCAAGACATTTTTCTTTGCTGGACATGAAACCACAGCACTCTTGCTCACTTGGACAGCTATGTTGCTAGCTAGCAACCCTCATTGGCAAGACAGAGTCAGAGATGAGGTCAAAGATGTCTTCAAGGGGGAAACTCCATCAGTTGATCAACTCTCCAAGCTCACTCTGTTAAACATGGTAATCAACGAGTCAATGAGGCTGTATCCTCCAGCAACCCTGCTTCCAAGAATGGCATTCAAAGACATTCAACTGGGTGACCTCTACATACCAAAAGGCCTATCAATTTGGATCCCAGTGTTGGCCATTCATCACAGTGAGGAGCTATGGGGCAAAGATGCAAACGAGTTCAACCCTGAGAGGTTTGCCGCAAAGCCATTCATGGCCGGCCGCTTCATACCGTTTGCTTCCGGCCCAAGAAACTGTGTTGGCCAGTCGTTTGCCATCATGGAAGCTAAGATCATATTGGCATTGTTGATCTCTCGGTTTAGCTTCACCATTTCTGAGAGTTACAGGCATGCACCTGTGGTTGTTCTCACCATTAAGCCAAAGTATGGTGTTCAAGTTTGCTTGAAGCCTTTAGAATATCCATAA 1473 0.4494 MAMVILTTLLVVLVSVVLKVAYDTFSCYWLTPMRIRKIMEKQGVHGPKPSFLMGNIKDMASLASRAVSQDMKTINHDIVARILPHFVAWSNQYGKRFLYWNGIEPRLCLTETALIREFLSKHSVITGKSWQQQQGNKHFIGRGLLMANGGDWQHQRHMVAPAFMGDRLKGYARHMVECTEDMLQSLQNTIKGGKTEVEIGECFTELTADIISRTEFGTSYQKGKQIFHLLTELQSRYNREIKSMKMEVEKLLMEIILSRKDCVEMGRTNSYGNDLLGILLDESGTLNLQLVMDECKTFFFAGHETTALLLTWTAMLLASNPHWQDRVRDEVKDVFKGETPSVDQLSKLTLLNMVINESMRLYPPATLLPRMAFKDIQLGDLYIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFAAKPFMAGRFIPFASGPRNCVGQSFAIMEAKIILALLISRFSFTISESYRHAPVVVLTIKPKYGVQVCLKPLEYP 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1105 490 Coils Coil 234 254 - -
Aed3g1105 490 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 Pfam Cytochrome P450 226 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 Pfam Cytochrome P450 86 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 483 - -
Aed3g1105 490 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 483 - -
Aed3g1105 490 SUPERFAMILY Cytochrome P450 79 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1105 490 Gene3D Cytochrome P450 28 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1105 Aed-Chr3 8928890 8932457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1105 1 349 Cytochrome P450 AT5G38450 60.743 2.54e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1105 K10717 - gmx:100812567 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1105 3 8928890 8932457 Aed3g1105 3 8928890 8932457 ECH