Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1082 ATGGGGGTTGAGGTTTGCATGAACGGTTCTTGCAAGGGTGACTTTGTGAGAGAATGGAAGCAAGGGTGGCCTCTTCAATCGGGTGGATTCGCTAGACTCTATAATAAGTGCGGATCTGCCTATGGGAGTTTAATTTTTTGTCATAAATATCACCTACATCAAACGAGGTGCATTAACTTTGGAGGCATAGGTTGTATTACCTACATAAGTACTTCCCAACTCCTTTTGATGCGAGATACTAGAAACACTAATGGGATTGTTAAATCAATAGAAAATAATGCAAGTGATCTTCGTATAGAACAAATCGATAATAGATTATTGGTGGATGATGCTAGCAAAAGAAGCCAAATGCAATTAAGTAGAACTGTTGAAGCTAGTGAAACTAGTCGTTTGGCCTTAAGCTGA 405 0.3926 MGVEVCMNGSCKGDFVREWKQGWPLQSGGFARLYNKCGSAYGSLIFCHKYHLHQTRCINFGGIGCITYISTSQLLLMRDTRNTNGIVKSIENNASDLRIEQIDNRLLVDDASKRSQMQLSRTVEASETSRLALS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1082 134 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1 53 - -
Aed3g1082 134 PANTHER LOW QUALITY PROTEIN: B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1-LIKE 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1082 Aed-Chr3 8531122 8531595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1082 1 87 B3 DNA Binding Superfamily AT2G30470 36.364 3.74e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1082 - - gmx:100782543 167.548