Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1081 ATGGATCCCTCTCGCCGTGCCCCACGCGCTCTGATCGACCCCGTGCCGAAGTTTCGGCAAGTGGGGTTCTTCGCCCCGCCAGAGCGCTCCCAATCGGGTCCTCCCGACCCGACCCACTCCTCTTCCTCTCCAATCTCCAACTCCCTCTCCCCCGTCATGATCCCGCCACCTCGCCACCTCTCCGACAACCTCCTCATCCACGCCCCCCGCCCCTCCGCCGCCTCCCCTCTCTCCTCCGCCAACGCCTCTGCCGCCGCCAACGCCGGCGGCAGCGGAAACTCCTTCGACCCGGCGGACTTCTTCCCCGCCTCGCTCTCGCCCGCGATGCCGTCGTCTTCGTACTCCAGCAGGATCGCCGCCACTGCCGGCGGCGGCTTCTTCAAGGGGAATGGCGCCGGCGGCGGGAAGGTGGCGTCGTCGTCGTCGTTTCCCCGCGGGGGATTCGACCTGACGGCGATGAAGGCGGCGAGTATCGTCGTGCCGGCGAGCGAGTTGACTACGGTTTCGGTGGTGAATGATTCGCTCGGGATTCCTGAAAAAGAAAAAGGAAACAAAGGAGGAGGGTCAGCGGTGGAAGTGAAAGACCAACCTAATAGTTCAAAACAGCAGAAACCGAAAACCTCAAAAGCTGAAAGACGTGCACTTCAAGAAGCTCAACGAGCTGCAAAGGCTGCAGCAAAAGATGAAGGAAATAAGGCATCTGGAACTGTGGCTTCAACAAATGCAAAATCAGCTAAAGCTGTAAAGCTTGCCCAGAAAGTTGACAATGCAGCAGTTGCAGCCTCTGAGAAGAAGGGAGGTGAGATTCCACAAGAAAAGGATAGAAAGAAAGATGCTCCTCAACCACGCATGCAGTATGACGACAAGAGCCGAGTGGAGAAAGCTAAACGACGTGCAGTGGTGAAACAAACTGAAGCTAGGAACAGAGTTGAGTTGTTCAGGCATTTGCCACAATATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAGGTTTTTCCATCTTTCTCCAGTGCACCCTGCTGTTTATAAGGTGGGTTTGCAGTATTTAACTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACAAGGTTCCACAGGAGAAGACTCTCGTGAGAGACTTGACAACAAAAATTGGTAGTTATGTATCATTTCTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGGAATGCAATTAGGTTTCTCAAAAGTCGGATAGCCAAGCTACCTTTGACCTTGTCAGAATCAGAAGCAAAAGCTTCTCTCCAGTCAGATATTGAGCGTTTTATAAGTGAAAAGATTATACTTGCCAACAAGGTAATAGTGAAGCATGCTGTCACCAAAATAAGAGACGGTGATGTTCTTCTAACTTTTGGGTCCTCATCAGCTGTTGAAATGATACTATTACATGCACATGAGTTGGGAAGACAGTTTCGTGTCGTGGTAGTTGACTCTCGTCCAAAGCTTAGAGGGCAACTTTTGCTTCGCAGGCTTGTTGAGAAAGGTCTTAGCTGTACATATACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGAGTTTTTCTGGGTGCTTCAGCAGTTTTGTCCAATGGAACAGTTTATTCAAGAGTAGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAACGGGTACAGTTGGATTCAATATGCTCAAATGAACTTGGCAATCCAGATGTCATTTCTAATGTACTGGGTAGAAAGGATGTTGACTACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTTTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGAATGGTTCCCCCCACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAGAGAACAGGTCTGGATATAA 1992 0.489 MDPSRRAPRALIDPVPKFRQVGFFAPPERSQSGPPDPTHSSSSPISNSLSPVMIPPPRHLSDNLLIHAPRPSAASPLSSANASAAANAGGSGNSFDPADFFPASLSPAMPSSSYSSRIAATAGGGFFKGNGAGGGKVASSSSFPRGGFDLTAMKAASIVVPASELTTVSVVNDSLGIPEKEKGNKGGGSAVEVKDQPNSSKQQKPKTSKAERRALQEAQRAAKAAAKDEGNKASGTVASTNAKSAKAVKLAQKVDNAAVAASEKKGGEIPQEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEARFFHLSPVHPAVYKVGLQYLTGDISGGNARCIAMLQAFQEAIKDYKVPQEKTLVRDLTTKIGSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESEAKASLQSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTFGSSSAVEMILLHAHELGRQFRVVVVDSRPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASAVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGNPDVISNVLGRKDVDYLDGWANIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1081 663 MobiDBLite consensus disorder prediction 34 49 - -
Aed3g1081 663 Coils Coil 208 228 - -
Aed3g1081 663 MobiDBLite consensus disorder prediction 176 246 - -
Aed3g1081 663 MobiDBLite consensus disorder prediction 259 301 - -
Aed3g1081 663 MobiDBLite consensus disorder prediction 205 227 - -
Aed3g1081 663 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 663 - -
Aed3g1081 663 Pfam Initiation factor 2 subunit family 354 646 IPR000649 GO:0044237
Aed3g1081 663 Gene3D - 449 656 IPR042529 -
Aed3g1081 663 MobiDBLite consensus disorder prediction 266 301 - -
Aed3g1081 663 SUPERFAMILY NagB/RpiA/CoA transferase-like 337 656 IPR037171 -
Aed3g1081 663 MobiDBLite consensus disorder prediction 1 64 - -
Aed3g1081 663 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 1 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1081 Aed-Chr3 8522743 8528889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1081 4 663 Eukaryotic Initiation Factors Gene Family AT5G38640 64.706 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1081 K03680 - gmx:100775998 1060.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1081 3 8522743 8528889 Aed3g1081 3 8522743 8528889 ECH