Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1074 ATGCTACAAAGGTCATTAAGTCAAGCTGATCAAGAGAAGCAAAGGAAGTCCCCAAATCCAACAGTTACTACAGATATGGAGGACATACAAGGCAAAACCGGGTTCAATCAAGATGGTATAAATGCTACAAAGGTCATTGAGACAAAATTTGATCAAAAGAAGGAAAGGATGTCGCCAAATCCCACTGTTAATACTATAGAGATGGAGGACATACGAGGCAGAACCGGGTTCAACCAAGATGGGATAAAAGCTACAAAGAAAGTCATTGAGCCAAAAGTTGATCAAGAGAAGGAAATGACGTCCCAAAATCCAATAGTTAATACTGCAGATATTGAGGACATACAAGGCAGAATCGGGTTGAACCAGGATGGGATAAATGCTACAAAGGTCATTGAGACAAAAGTTGATCAAAAGAAGGAAATGACGTCCTTAAATCCAACAGTTTATATTGCATATCTAGAGGACATACAAGGTAGAACCATGTTCAACCTAGATGAGATAAATGCTACAGAGAAAATCTTTGAGCCAAAAGCTGTTGATCAAGAGAAGGAAAGGAAGTCCCCAAAACCATTAGTTAATACTACAGATATAGAGAACACACAAGGCAGAACCGGGTTCAACCAAGATGGGATAAATGTTGGAAAGAATGTCATTGAGCCAAAAGCTTATCCAGAGAAGGAAAGGAAGTCCCTAAATCCAATATTTAATAGTGTTTCCTTAACTGATTTTTTCACAAGTAATCAAATAAGGGAACACATTACAAGTCTTAGAAAGCAATTTAATCAGTGGGAACACTTTCTTTTGCCCCCGTGCCAATTTATTGCTTTTGTTGTGGCATCCGCATTAAGCGAAACGTATGCTACTACTACAGAAGAGAAGAAGATGACACACAACATTGCTTTTGCGGTGCTTGCTTTAAGAATTCTCGAGTGGGTTGAATGTAATAAATGCAAAAGCTGGCAGCATCAAGTGTGTGCACTCTATAATGATAAAAGAGATTTGGATTACAGGGCTGAGTATACATGTCCTCCATGCCGCTTAGAGGAAATTGGAAATGGAAATCATGTACCCTTGCCGAAGATAGCTGCTATGTTTGGTGCTAAGGACTTGCCAAGAACCATGCTTAGTGACCACATAGAGAGGAGACTTTTTAAGCGTCTCAGGCAAGAGAATGAAGATTGGGAAAAATTTAAAGCGAATAAGAATCTTGATGAGATTTTGGATGAAGAAAGTCTTTCTGTTAGAGTGGTGTTATCTGTTGACAAACAATTGAAAGTGAAGAAACAGTTTCTGGACATCTTTGAGGGAAGAATTACCCTGACGAATTTTGTTATACAGCAAAAGAGTGGATGTATGCCTTTTCTCAATGTATGCTCAAGAGTTTGGCTCGGATTGTGGCTCTCTCCCAATCAGCGTAGTGTTTATATTTCATATCTCGATTCTGTCAAGTATTTTAGGCCTGAAAGAGTGACCAAGAGTGGAGCAGCTCTTCGTACCATCGTTTACCATGAGATATTGATTGGATACCTTGATTTTTGCAAGAAACGAGGTTTCACAACTTGCTATATATGGACCTGTCCACCTATGAAGGGAGAAGATTATATACTCTATTGTCATCCTGACACTCAAAAAACTCCCAAGAAAGATAAGCTGCGGCACTGGTATCATTCAATGCTAAGAAAGGCTGCTAAAGAAAACACCGTTGTTGGTTTAACTAACCTATATGATCAATTCTTTGTTACTGATGAAAACTGCAAATTCAAGGTATCAGCTGCTCGTTTGCCTTACTTTGATGGGGACTTCTGGTGTGGAAATGCTATGGATAGAGCCAGGCAATTTGAAAAAGAGAGTGGAGGAGATTATGCAATGATCTTCGATAAAGTAGTATCGAAAAGATCTTTGAAGACCATGGGATATGTGAATCCTTCTAAAGAAGCTGTCAAAGACATTATAGTGATGCAGAAAGTGGGACAAACCATATTACCTTTCAAGGAAGATTTTATCATAGTTCAATTACAGTATGTTTGCATGCACTGCCGTGAAGTGATAGCGTCTGGTAAGCGATGGATTTGCACTGAATGCAAGGAAATTCAGGAGTGTGAAAGATGCCATACTGCTGACTCACACATTTTTGGGAATGGAAAGAGGCATAAACTTTGTCAGGTCATCAGGGATGACATCCTTGTTGATACTAAGGAGAACGATATTACCCTTGATAATGGGTTATTCGATACCAGGCACAGCTTTTTGGGCTTCTGCCAAAGGAACAGGTTTCAGTTTGACTCACTCCGCAGAGCCAAGTATTCCTCAATGATGATCCTCTTTCTTCTGAAGAATCCTAATATTATGGATGTTGTACAAACATGCCGCGTTTGCTCTAGAAAAGATGCTTCCCAACGCTACTGGAAATGTGACAATTGCCCTGAGTTCACTGTCTGCTCTGCATGCTACAACGAGAGCGGTGATGATTGCCATGCACACACGTTGTATGAAGCTTATTATTCACAAGCACAATCTGCTTCAGCAGGGAATCAAGAGAAGAAGATCTCAGCAGTGTTGCAGGATCTGCTGGATGTTATGCAGCATGCATCGCTGTGTCACTCAACTAAAACTCAACCATGCACTTACCGATATTGCCTTCAAATTAAAAAGCTGTTCTCTCATGCCAGAAGGTGCAATGTTCGAGTTTCTGGGGGATGCAAATTTTGTAAGAAGGTTTGGCAGGGACTGGCTTTGCACTCGAAGAGTTGTAAAAACTCAGCATGTCACATCCCTCGTTGCATGTGTGGATTTGCAGAAGAATGGTTAGTAGCGCAATCTGAATCGTGCCATAGGGCTGCAGTTTTGGAATTGGAAGACAGCAAAGAACCATCTGTTCAATGA 2883 0.4041 MLQRSLSQADQEKQRKSPNPTVTTDMEDIQGKTGFNQDGINATKVIETKFDQKKERMSPNPTVNTIEMEDIRGRTGFNQDGIKATKKVIEPKVDQEKEMTSQNPIVNTADIEDIQGRIGLNQDGINATKVIETKVDQKKEMTSLNPTVYIAYLEDIQGRTMFNLDEINATEKIFEPKAVDQEKERKSPKPLVNTTDIENTQGRTGFNQDGINVGKNVIEPKAYPEKERKSLNPIFNSVSLTDFFTSNQIREHITSLRKQFNQWEHFLLPPCQFIAFVVASALSETYATTTEEKKMTHNIAFAVLALRILEWVECNKCKSWQHQVCALYNDKRDLDYRAEYTCPPCRLEEIGNGNHVPLPKIAAMFGAKDLPRTMLSDHIERRLFKRLRQENEDWEKFKANKNLDEILDEESLSVRVVLSVDKQLKVKKQFLDIFEGRITLTNFVIQQKSGCMPFLNVCSRVWLGLWLSPNQRSVYISYLDSVKYFRPERVTKSGAALRTIVYHEILIGYLDFCKKRGFTTCYIWTCPPMKGEDYILYCHPDTQKTPKKDKLRHWYHSMLRKAAKENTVVGLTNLYDQFFVTDENCKFKVSAARLPYFDGDFWCGNAMDRARQFEKESGGDYAMIFDKVVSKRSLKTMGYVNPSKEAVKDIIVMQKVGQTILPFKEDFIIVQLQYVCMHCREVIASGKRWICTECKEIQECERCHTADSHIFGNGKRHKLCQVIRDDILVDTKENDITLDNGLFDTRHSFLGFCQRNRFQFDSLRRAKYSSMMILFLLKNPNIMDVVQTCRVCSRKDASQRYWKCDNCPEFTVCSACYNESGDDCHAHTLYEAYYSQAQSASAGNQEKKISAVLQDLLDVMQHASLCHSTKTQPCTYRYCLQIKKLFSHARRCNVRVSGGCKFCKKVWQGLALHSKSCKNSACHIPRCMCGFAEEWLVAQSESCHRAAVLELEDSKEPSVQ 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1074 960 MobiDBLite consensus disorder prediction 192 210 - -
Aed3g1074 960 MobiDBLite consensus disorder prediction 1 37 - -
Aed3g1074 960 SMART KAT11_2 403 683 IPR013178 GO:0004402|GO:0006355|GO:0016573
Aed3g1074 960 Gene3D TAZ domain 842 933 IPR035898 -
Aed3g1074 960 Pfam TAZ zinc finger 854 927 IPR000197 -
Aed3g1074 960 SUPERFAMILY FYVE/PHD zinc finger 310 350 IPR011011 -
Aed3g1074 960 Gene3D - 784 832 IPR043145 -
Aed3g1074 960 SUPERFAMILY RING/U-box 765 833 - -
Aed3g1074 960 SUPERFAMILY RING/U-box 651 720 - -
Aed3g1074 960 MobiDBLite consensus disorder prediction 179 210 - -
Aed3g1074 960 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 308 349 IPR013083 -
Aed3g1074 960 SUPERFAMILY TAZ domain 846 928 IPR035898 -
Aed3g1074 960 SMART TAZ_2 847 928 IPR000197 -
Aed3g1074 960 Pfam Histone acetylation protein 461 603 IPR013178 GO:0004402|GO:0006355|GO:0016573
Aed3g1074 960 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 364 782 IPR031162 GO:0004402
Aed3g1074 960 PANTHER CBP/P300-RELATED 310 928 IPR013178 GO:0004402|GO:0006355|GO:0016573
Aed3g1074 960 PANTHER CBP/P300-RELATED 68 262 IPR013178 GO:0004402|GO:0006355|GO:0016573
Aed3g1074 960 PANTHER HISTONE ACETYLTRANSFERASE HAC2 310 928 - -
Aed3g1074 960 PANTHER HISTONE ACETYLTRANSFERASE HAC2 68 262 - -
Aed3g1074 960 ProSiteProfiles Zinc finger TAZ-type profile. 845 930 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1074 Aed-Chr3 8484666 8490407 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Aed3g1074 HAT_KAT11 3.2e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1074 K04498 - gmx:102664049 1130.16