Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1026 ATGCCAATGCCAATGCCATTGCTCACAAACATACAACGCATTGAGGCAATGCTCAATGCACCGAACACCACCCTTAGTGTATCCACTAAAAGATGGCACTCTGCATTCATGGCCATCTATTGTTCCCGAGCTATCATGACGTCATACTCCTCCACTCTCAAGAAACAAAACAAAACCAAAGAAAAAGCCTTATTATCTTCACCAACACCACCATCTTTCACTGTTGTTGATTTGAACCCTCACCATGCCTTTGATATAGACCAAACAACCCTCACCGATATTGTCAAAGAAAAAGACCTTGAAAACCTTGAAAATTTTGGTGGGGTTGAAGGGGTGGCTAAGGCCCTTGAAACACACGTTGAGTATGGTATCAAAGGTGGTGGTGATGATGATGCTGAAGACATCACACGTAGAAAACAAGTGTTTGGTTCCAACACTTACCCCAAGCCACCTTCCAAAGGGTTCCTCCACTTTGTAGTGGAAGCCTTTAAGGATGTCACTATTCTAATCCTCATGGTCTGTGCTTCCCTTTCCCTTGGCTTTGGAATCAAGGAGCATGGCATCAAAGAAGGTTGGTACGACGGTGGAAGCATCTTCGTTGCTGTGTTCATTGTTATTTCCTTGTCTGCAGTGAGCAACTTCAGACAGAACAGACAGTTTGACAAATTGTCCCAAGTGAGCAATGACATACAAATTGAAATGGTGAGAGGTGGAAGGCGCCAACATGTTTCAATCTTTGAAATAGTTGTTGGTGATGTCATTTGCTTGAAGATTGGAGATCAAGTGCCAGCAGATGGGTTATTCATAGAAGGGCACTCGCTTAAAGTTGATGAGTCAAGCATGACAGGAGAGAGTGACCATGTTGAGATTAGTAGACAGCACCATCCTTTTTTGTTCTCTGGCACCAAGGTGGCTGATGGGTATGCCAAGATGCTTGTTACATCGGTTGGTATGAACACAACATGGGGCCAAATGATGAGTTCAATAAGCAAAGATACTAATGAGCAAACTCCTTTGCAAGAGAGGCTAAACAAGCTTACTTCATCTATTGGGAAGGTTGGTTTGGCTGTGGCTTTTCTTGTCCTTGTTGTTTTGTACTTCACTGGGAACACAAAGGATGAGAGTGGGGTTAGAGAGTTCAATGGAAGCAGGTCCACGTTTGATGATATAATGAATGCTGTTGTTAGGATTGTTTCTGATGCAGTTACCATTGTTGTTGTTGCAATTCCTGAGGGTCTTCCACTGGCTGTGACTCTCACCTTGGCTTATTCAATGAAGAAAATGATGGCTGACCAAGCCATGGTTGCTCCATTTGTTCTTCAATTGATCCAAGAAGGAGTGGCTCTCAACACAACTGGTAGCGTGCACAAGTCCAGTAAATCTGCAGGTTCTGAATTTGAGTTTTCGGGTAGTCCAACAGAAAAAGCAATCCTATCTTGGGCAGTTTTGGAATTAAACATGGAGATGGAGTACTTGACAAGAAACTGTTCCATCATTCATGCTGAGACCTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGCTGAGAAGGAAGGGAGACAACACAGTTAATGCACACTGGAAAGGAGCAGCTGAGATGGTACTAAAGCTGTGTTCAAGATACTATGATGCTTCTGGCACTGTGAAAGATCTTGGCAATGATAGCATGTTGAAGTTTGAGCACATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATTGCTTTTGCACACGTAGAAGTAGCAGCTGAAGAAGAGCTTGGAGATTCTGAAGAAGGCAATGCAATGGTGAAAGTGAAAGACAATGGAGAGGAGTTTCGCAACTACACACCCGAAGAGAGATTAGAGAAGGTGGACAAAATCTGCGTGATGGCAAGATCTTCTCCTTTTGACAAACTTCTAATGGTTCAATGCCTGAAACAAAAAGGCCATGTTGTTGCTGTCACTGGGGACGGCACAAATGATGCACCAGCACTCAAAGAAGCTGATATTGGACTCTCTATGGGAATCCAAGGCACTGAAGTGGCAAAAGAGAGCTCAGACATTGTCATATTGGATGACAATTTTGCATCTGTGGTCACTGTCTTAAGATGGGGAAGATGTGTTTACAACAACATCCAGAAGTTCATCCAGTTTCAATTGACAGTGAATGTGGCAGCACTTACAATCAACTTTGTGGCAGCAGTTTCAGCTGGAGAAGTGCCACTGACAGCAGTGCAACTATTATGGGTGAACTTGATCATGGACACATTAGGTGCATTGGCTCTTGCAACAGAAAAACCTACAATGGAGTTGATGGACAATCCACCAGTAGGTAGAACAAAACCTCTCATCACCAATGTCATGTGGAGGAACCTCTTGGCTCAAGCATTGTACCAAATTGCAGTTTTGCTGACCCTTCAGTTCAGAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTGAATGACACATTGATTTTCAACACATTTGTTCTTTGTCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAGGAATGTCTTCAAAGGCATACACAGGAGCAAGTTGTTTTTGGGAATTATTGGCATCACAATTATCCTTCAGGTGGTGATGGTTGAGTTTCTGAAGAAATTTGCTGACACAGAGAGGCTAAATTGGGGGCAATGGGGTATCTGCATTGGTTTAGCTGCAGTTTCTTGGCCAATTGGTTGGGTTGTGAAGTTGATTCCTGTTCCAGATAAACCATTTCTCAGTTTTTTGAGCAAGAAGAAATGA 2760 0.4304 MPMPMPLLTNIQRIEAMLNAPNTTLSVSTKRWHSAFMAIYCSRAIMTSYSSTLKKQNKTKEKALLSSPTPPSFTVVDLNPHHAFDIDQTTLTDIVKEKDLENLENFGGVEGVAKALETHVEYGIKGGGDDDAEDITRRKQVFGSNTYPKPPSKGFLHFVVEAFKDVTILILMVCASLSLGFGIKEHGIKEGWYDGGSIFVAVFIVISLSAVSNFRQNRQFDKLSQVSNDIQIEMVRGGRRQHVSIFEIVVGDVICLKIGDQVPADGLFIEGHSLKVDESSMTGESDHVEISRQHHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSISKDTNEQTPLQERLNKLTSSIGKVGLAVAFLVLVVLYFTGNTKDESGVREFNGSRSTFDDIMNAVVRIVSDAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVAPFVLQLIQEGVALNTTGSVHKSSKSAGSEFEFSGSPTEKAILSWAVLELNMEMEYLTRNCSIIHAETFNSKKKRSGVLLRRKGDNTVNAHWKGAAEMVLKLCSRYYDASGTVKDLGNDSMLKFEHIIQGMAASSLRCIAFAHVEVAAEEELGDSEEGNAMVKVKDNGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALTINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDNPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLQFRGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKRNVFKGIHRSKLFLGIIGITIILQVVMVEFLKKFADTERLNWGQWGICIGLAAVSWPIGWVVKLIPVPDKPFLSFLSKKK 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1026 919 Pfam E1-E2 ATPase 232 429 - -
Aed3g1026 919 Gene3D - 133 330 - -
Aed3g1026 919 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 622 730 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed3g1026 919 PANTHER CATION TRANSPORTING ATPASE 14 435 - -
Aed3g1026 919 PANTHER CATION TRANSPORTING ATPASE 602 893 - -
Aed3g1026 919 Gene3D - 161 435 - -
Aed3g1026 919 SUPERFAMILY HAD-like 604 754 IPR036412 -
Aed3g1026 919 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 436 585 IPR023299 GO:0000166
Aed3g1026 919 PANTHER CALCIUM-TRANSPORTING ATPASE 14 435 - -
Aed3g1026 919 PANTHER CALCIUM-TRANSPORTING ATPASE 602 893 - -
Aed3g1026 919 Pfam Cation transporter/ATPase, N-terminus 107 178 IPR004014 -
Aed3g1026 919 Pfam Cation transport ATPase (P-type) 454 540 - -
Aed3g1026 919 PRINTS P-type cation-transporting ATPase superfamily signature 673 685 - -
Aed3g1026 919 PRINTS P-type cation-transporting ATPase superfamily signature 277 291 - -
Aed3g1026 919 PRINTS P-type cation-transporting ATPase superfamily signature 649 668 - -
Aed3g1026 919 SUPERFAMILY Calcium ATPase, transduction domain A 231 328 IPR008250 -
Aed3g1026 919 Pfam Cation transporting ATPase, C-terminus 734 904 IPR006068 -
Aed3g1026 919 PANTHER CATION TRANSPORTING ATPASE 436 586 - -
Aed3g1026 919 PANTHER CALCIUM-TRANSPORTING ATPASE 436 586 - -
Aed3g1026 919 SUPERFAMILY Calcium ATPase, transmembrane domain M 107 906 IPR023298 -
Aed3g1026 919 Gene3D - 451 603 IPR023299 GO:0000166
Aed3g1026 919 Gene3D - 661 907 - -
Aed3g1026 919 SMART Cation_ATPase_N_a_2 105 183 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1026 Aed-Chr3 7940764 7944134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1026 14 919 Primary Pumps ATPases AT3G22910 60.158 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1026 K01537 - jre:109022300 1270.37