Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1023 ATGCCAATGCCAATGCCATTGCTCACAAACATGCAACGCATTGAGGCACTGCTCAATGCACCGAACACCACCGTTAGTGTATCAACTAAAAGATGGCACTCTGCATTCATGGCCATCTATTGTTCCCGAGCTATCATGACGTCATACTCCTCCACTCTCAAGAAACCAAACAAAACCAAAGAAAAAGCCTTATTATCTTCACCAACACCACCATCTTTCACTGTTGTTCATTTGAACCCTCACCATGCCTTTGATACAGACCAAACAACCCTCACCGATATTGTCAAAGAAAAAGACCTTGAAAACCTTGAAAATTTTGGTGGGGTTGAAGGGGTGGCTAAGGCCCTTGAAACACACGTTGAGTATGGTATCAAAGGTGGTGGTGATGATGATGCTGAAGACATCACACGTAGAAAACAAGTGTTTGGTTCCAACACTTACCCCAAGCCACCTTCCAAAGGGTTCCTCCACTTTGTAGTGGAAGCCTTTAAGGATGTCACTATTCTAATCCTCATGGTCTGTGCTTCCCTTTCCCTTGGCTTTGGAATCAAGGAGCATGGCATCAAAGAAGGTTGGTACGACGGTGGAAGCATCTTCGTTGCTGTGTTCATTGTTATTTCCTTGTCTACAGTGAGCAACTTCAGACAGAACAGACAGTTTGACAAATTGTCCCAAGTGAGCAATGACATACAAATTGAAATGGTGAGAGGTGGAAGGCGCCAACATGTTTCAATCTTTGAAATAGTTGTTGGTGATGTCATTTGCTTGAAGATCGGAGATCAAGTGCCAGCAGATGGGTTATTCATAGAAGGGCACTCACTTAAAGTTGATGAGTCAAGCATGACAGGAGAGAGTGACCATGTTGAGATTAGTAGACAGCACCATCCTTTTTTGTTCTCTGGCACCAAGGTGGCTGATGGGTATGCCAAGATGCTTGTTACATCGGTTGGTATGAACACAACATGGGGCCAAATGATGAGTTCAATAAGCAAAGATACCAATGAGCAAACTCCTTTGCAAGAGAGGCTAAACAAGCTTACTTCATCCATTGGGAAGGTTGGTTTGGCTGTGGCTTTTCTTGTCCTTGTTGTTTTGTTGGTTAGGTACTTCACTGGGAACACAAAGGATGAGAGTGGGGTTAGAGAGTTCAATGGAAGCAGGTCCACGTTTGATGATATAATGAATGCTGTTGTTAGGATTGTTTCTGATGCAGTTACCATTGTTGTTGTTGCAATCCCTGAGGGTCTTCCATTGGCTGTGACTCTCACCTTGGCTTATTCAATGAAGAAAATGATGGCTGACCAAGCAATGGTTGCTCCATTTGTTCTTCAATTGATCCAAGAAGGAGTGGCTCTCAACACATCTGGTAGCGTGCACAAGTCCAGTAAATCTGCAGGTTCTGAATTTGAGTTTTCGGGTAGTCCAACAGAAAAAGCAATCCTATCTTGGGCAGTTTTGGAATTAAACATGGAGATGGAGCACTTGACAAGAAACTGTTCCATCATTCATGTTGAGACCTTCAACTCAGAGAAGAAAAGAAGTGGAGTTTTGCTGAGAAGGAAGGGAGACAACAGGGTTAATGCACATTGGAAAGGAGCAGCTGAAATGGTACTAAAGCTGTGTTCAAGATACTATGATGCTTCTGGCAATGTGAATGATCTTGACAATGATAGCATGTTGAAGTTTGAGCACATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATTGCTTTTGCACACGTAGAAGTAGCAGCTGAGGAAGAGCTTGGAGATTATGAAGAAGGCAATGCAGTGGTGAAAGTGAAAGACAGTGGTTTAACATTGTTGGGACTTGTGGGAATTAAGGATCCATTGATTGAAGGAGAGGAGTTTCGCAACTACACACCCGAAGAGAGATTAGAGAAGGTGGACAAAATCTGCGTGATGGCAAGATCTTCTCCTTTTGACAAACTTCTAATGGTTCAATGCCTGAAACAAAAAGGCCATGTAGTTGCTGTCACTGGGGACGGCACAAATGATGCACCAGCACTCAAAGAAGCTGATATTGGACTCTCTATGGGAATCCAAGGCACTGAAGTGGCAAAAGAGAGCTCAGACATTGTCATATTGGATGACAATTTTGCATCTGTGGTCACTGTCTTGAGATGGGGAAGATGTGTTTACAACAACATCCAGAAGTTCATCCAGTTTCAATTGACAGTGAATGTTGCAGCACTTACAATCAACTTTATAGCAGCAGTTTCAGCTGGAGAAGTGCCACTGACAGCCGTGCAACTATTATGGGTGAACTTGATCATGGACACATTAGGTGCATTGGCTCTTGCAACAGAAAAACCTACAATGGAGTTGATGGACAATCCACCAGTAGGTAGAACAAAACCTCTAATCACCAATGTCATGTGGAGGAACCTCTTGGCTCAAGCATTGTACCAAATTGCAGTTTTGCTGACCCTTCAGTTCAGAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTGAATGACACATTGATTTTCAACACATTTGTTCTTTGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAGGAATGTCTTCAAAGGCATACACAGGAGCAAGTTGTTTTTGGGAATTATTGGCATCACAATTATCCTTCAGGTGGTGATGGTTGAGTTTCTCAAGAAATTTGCTGACACAGAGAGGCTAAATTGGGGGCAATGGGGTATCTGCATTGGTTTCGCTGCAGTTTCTTGGCCAATTGGTTGGGTTGTGAAGTTGATTCCTGTTCCAGATAAACCATTTCTCAGTTTTTTGAGTAAGAAGAAATGA 2817 0.4302 MPMPMPLLTNMQRIEALLNAPNTTVSVSTKRWHSAFMAIYCSRAIMTSYSSTLKKPNKTKEKALLSSPTPPSFTVVHLNPHHAFDTDQTTLTDIVKEKDLENLENFGGVEGVAKALETHVEYGIKGGGDDDAEDITRRKQVFGSNTYPKPPSKGFLHFVVEAFKDVTILILMVCASLSLGFGIKEHGIKEGWYDGGSIFVAVFIVISLSTVSNFRQNRQFDKLSQVSNDIQIEMVRGGRRQHVSIFEIVVGDVICLKIGDQVPADGLFIEGHSLKVDESSMTGESDHVEISRQHHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSISKDTNEQTPLQERLNKLTSSIGKVGLAVAFLVLVVLLVRYFTGNTKDESGVREFNGSRSTFDDIMNAVVRIVSDAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVAPFVLQLIQEGVALNTSGSVHKSSKSAGSEFEFSGSPTEKAILSWAVLELNMEMEHLTRNCSIIHVETFNSEKKRSGVLLRRKGDNRVNAHWKGAAEMVLKLCSRYYDASGNVNDLDNDSMLKFEHIIQGMAASSLRCIAFAHVEVAAEEELGDYEEGNAVVKVKDSGLTLLGLVGIKDPLIEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALTINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDNPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLQFRGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKRNVFKGIHRSKLFLGIIGITIILQVVMVEFLKKFADTERLNWGQWGICIGFAAVSWPIGWVVKLIPVPDKPFLSFLSKKK 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1023 938 Gene3D - 306 440 - -
Aed3g1023 938 SUPERFAMILY Calcium ATPase, transmembrane domain M 107 925 IPR023298 -
Aed3g1023 938 PRINTS P-type cation-transporting ATPase superfamily signature 277 291 - -
Aed3g1023 938 PRINTS P-type cation-transporting ATPase superfamily signature 692 704 - -
Aed3g1023 938 PRINTS P-type cation-transporting ATPase superfamily signature 613 623 - -
Aed3g1023 938 PRINTS P-type cation-transporting ATPase superfamily signature 668 687 - -
Aed3g1023 938 SUPERFAMILY Calcium ATPase, transduction domain A 231 328 IPR008250 -
Aed3g1023 938 Pfam E1-E2 ATPase 232 432 - -
Aed3g1023 938 Gene3D - 454 619 IPR023299 GO:0000166
Aed3g1023 938 SUPERFAMILY HAD-like 622 773 IPR036412 -
Aed3g1023 938 PANTHER CATION TRANSPORTING ATPASE 620 912 - -
Aed3g1023 938 PANTHER CALCIUM-TRANSPORTING ATPASE 620 912 - -
Aed3g1023 938 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 439 619 IPR023299 GO:0000166
Aed3g1023 938 Gene3D - 129 305 - -
Aed3g1023 938 PANTHER CATION TRANSPORTING ATPASE 439 618 - -
Aed3g1023 938 PANTHER CATION TRANSPORTING ATPASE 14 438 - -
Aed3g1023 938 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 641 748 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed3g1023 938 Pfam Cation transporter/ATPase, N-terminus 107 178 IPR004014 -
Aed3g1023 938 Gene3D - 680 926 - -
Aed3g1023 938 Pfam Cation transporting ATPase, C-terminus 753 923 IPR006068 -
Aed3g1023 938 Pfam Cation transport ATPase (P-type) 461 543 - -
Aed3g1023 938 SMART Cation_ATPase_N_a_2 105 183 IPR004014 -
Aed3g1023 938 PANTHER CALCIUM-TRANSPORTING ATPASE 439 618 - -
Aed3g1023 938 PANTHER CALCIUM-TRANSPORTING ATPASE 14 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1023 Aed-Chr3 7872229 7875606 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1023 14 938 Primary Pumps ATPases AT3G22910 61.659 0.0 1156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1023 K01537 - gmx:100793918 1587.78