Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1013 ATGCAAACCAGTGAAGTAGTCTCAGGCCACAACTATCTACTCCCTTCAAACCCTTGTCCTAATTACCCTCCTAACAACAACAACAACTACACCACCATGTTCCAAAACAACATTCCTACATTTCAGTTCCAAAGATTCTCTAATAATAACCAATTACATGGCTACAACAACCTTAACCATGAGTACTTGAGTCCGCAATATTCTTCGTCGTGCATAAGCAGCAACTCCACTTCTGACGAGGCGGAGGAGCAGCAGCTGAGCCTGATCAACGAGAGGAAGCACAGGAGGATGATATCGAACCGCGAGTCGGCACGGCGGTCGAGGATGAGGAAGCAGAAGCACCTCGACGAGCTCTGGTCGCAGGTGGTCTGGCTCCGGAATGAGAACCACCAGCTGGCCGACAAGCTCAGCAGCGTCTCGGAGAGGCATGACGTGGCTCTCCGAGAAAATGCTCAGCTGAGAGAGGAAATCTCTGAGCTTCGCCAAATCATTAGGGGCATGCAGATACACAGCCCCTGTCACAACAACAACAACAACCCCTCCTCGTTCATCACAACTCCTCATCGTCATGATCACGATCATGACGATGATGTTGTTGTTGATGATGTCCCCTTCAGCAGCATATCTCAGATCTGA 636 0.4969 MQTSEVVSGHNYLLPSNPCPNYPPNNNNNYTTMFQNNIPTFQFQRFSNNNQLHGYNNLNHEYLSPQYSSSCISSNSTSDEAEEQQLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLADKLSSVSERHDVALRENAQLREEISELRQIIRGMQIHSPCHNNNNNPSSFITTPHRHDHDHDDDVVVDDVPFSSISQI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1013 211 PANTHER BZIP TRANSCRIPTION FACTOR 1 194 - -
Aed3g1013 211 SUPERFAMILY Leucine zipper domain 92 141 IPR046347 GO:0003700|GO:0006355
Aed3g1013 211 Coils Coil 136 170 - -
Aed3g1013 211 MobiDBLite consensus disorder prediction 171 185 - -
Aed3g1013 211 Pfam bZIP transcription factor 92 141 IPR004827 GO:0003700|GO:0006355
Aed3g1013 211 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 90 160 IPR004827 GO:0003700|GO:0006355
Aed3g1013 211 SMART brlzneu 88 152 IPR004827 GO:0003700|GO:0006355
Aed3g1013 211 CDD bZIP_plant_GBF1 93 144 IPR045314 GO:0003700|GO:0006355
Aed3g1013 211 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 95 110 IPR004827 GO:0003700|GO:0006355
Aed3g1013 211 MobiDBLite consensus disorder prediction 171 199 - -
Aed3g1013 211 Gene3D - 90 144 - -
Aed3g1013 211 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 194 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1013 Aed-Chr3 7783897 7784532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1013 4 172 bZIP Transcription Factor Family AT3G30530 54.857 2.48e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed3g1013 bZIP_1 7.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1013 - - gmx:100791105 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1013 3 7783897 7784532 Aed3g1013 3 7783897 7784532 ECH
Aed3g1013 3 7783897 7784532 Aed3g1013 3 7783897 7784532 PCT