Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1009 ATGACAATTGAAGGTCTTGAACATAAGGGAAAGAAGACAATATCAAGGAAGAACAGAGTAGTTGCTGATGAGAAGGCACCTTTGATACCTAAGACTCATGATGCTGATACTGAAAGTTTTGATGAATTCGATGGTGCTTCATTTTCTGGGGCAGTTTTCAACTTGGCCACCACAGCTATTGGTGCTGGGATCATGGGATTGCCAGCATGTGTGAAAGTTGGGGATGGTTCCTGGTCTTCTTGCTATAATCTTAACTGCTTTTCAATTGGGTTCATAATCAGGGTTTCCCGGGCAGGAAATCTTACTTCTTATGGGAATCTCGTGGGGGATTCATTTGGCAAATTTGGAAAAGCTCTGGTGCAGATATGTGTTATTATCAATAACGTCGGAATGCTGATTATTTACATGATTATTATTGGTGATGTGATTTCTGGAACATCTTCTTCCAGTGGAATTCATCATTCTGGTGTACTTGAAGGATGGTTTGGAGTTCACTGGTGGACAGGACGTGAATTTGTTCTTCTTTTCACAACATTTGCTGTGTTTTCACCTTTGTCCTGCTTCAAGCGAATTGATTCGTTGAGATACACTTCTGCATTATCATTTGGCTTAGCAGTTGTTTTTCTTGTTATTGCTGTGGGAATCTCAATTTTCAAGATTGCAATTGGAGGCATTGGGATGCCTAGACTCTTCCCGATCATTACGGATGTATCCTCAGTTTTTGAACTGTTTACTGTAGTTCCTGTGGTTGTGACTGCCTATTTATGCCACTTCAATGTTCACAGCATAGATAATGAATTGGAGGACTCCTCACAGATACACGGGATTGTGCGTACTTCCCTTGCTCTATGTGCTTCAGTGTACTTACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGGAACTCTTGATGACGTTCTTGCTAATTTTGATACTGATCTTGGAATTCCTTATGGTTCTGTGCTCAACGATGCCATTCGTTTCTGCTATGCTGCACATCTTGTGCTTGTATTCCCTGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGTCTCGTATTTCCATCAGCTAGGCCTTTGGTTCTAGATAACTTCAGATTTGCATCAATTACTGTGGCCCTTATTGTTGCTGCCTTTTTGGGAGCAAATTTCATTCCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACGGCTGCTGCATCTTTAGCATTCATATTTCCATCTGCCATCACCCTAAAGGATCGGTACAACATTGCAACTAAAAAAGACAAGATTCTATCTGTCTTTATGATAGTCCTCGCAGTCTTCGCGAATGTCATGGCTGTATACAGTGACGCCTTTACCCTGATCAAGAACAGTATAATGAAACTTTCTGGATCCTGGGGTGTCTTGATTCTCATTGTTCAGGTGAAGATGAGGAGTGGAAGTGTTGCATCTGAGGCAGAGGAGCAAAAATCTGGGAGGAACAAGAGAGTTGTTGATGAGAATGCTCCTTTGATCCCCAAGTCTCAGAAGAGTGATGCTGCAGGGTTTGATGAGTTTAATGGGGCTTCATTTTCTGGTGCTGTTTTCAACTTATCCACCACAATTATTGGTGCTGGGATCATGGGGTTGCCAGCATGTGTGAAGAAGTTGGGGATGGTGCCTGGTCTTCTTGCTATAATCTTAACAGGTTTCTTGACTGAGAAGTCAATTGAGTTCATGATTAGGATTTCTCGGGTGGGGAATCTTTCTTCTTATGGGAGTCTCATGGGGGATGCTTTTGGGAAATATGGGAAAGCTTTGGTGCAGATATGTGTTGTAGTCAATAACATTGGTGTGTTGATTATTTACATGATTATTATTGGTGATGTGATTTCTGGAACGTCTTCTAGTAGAACTCACCATTCTGGTGTCCTTGAAGGATGGTTTGGAGTCCACTGGTGGACTGGGCGAGCCTTTGTTCTTTTGTTTGCAACACTTGCCGTGTTTGCGCCTTTGGTCAGCTTTAAGCGAATTGATTCGTTGAAATTCACATCTGCATTATCAGTAGGACTAGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATCTTCAAGATTATAATAGGAGGCATTGTAATGCCCAGACTTTTCCCGATCATTACAGATGCAGCATCAGTTTTTGAGCTGTTCACTGTAGTTCCTGTGCTTGTGACGGCCTATATCTGCCACTACAACGTTCACAGCATAAATAATGAACTTGAGGAGTCCTCACAGATGCACGGCGTTGTACGCACTTCCCTTGCTCTATGTGCTTCAGTGTACTTACTGACAAGCTTCTTTGGATTCCTTCTATTTGGTGAAGGAACTCTTGATGATGTGCTTGCCAATTTTGACACTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAACGATGCTGTTCGTTTCAGCTATGCTGCACATCTTGTGCTTGTATTCCCAGTTGTCTTCTATGCAGTGCGCGTCAATCTTGATGGTCTCATGTTTTCATCATCTAGGCCTTTGCGTCAAGATAACTTCAGATTTGCATTAATTACTATTTCACTTATTGGTGTTATCTTCGTGGGAGCAAATTTTATACCAAGCATTTGGGATATTTTCCAGTTTATTGGAGCAACAGCTGCTGTTTGTGTAGCATTCATATTTCCAGCCGCTGTCACTCTTCGGGATCGATACAACATAGCAACTAAAACCGACAAGGTTCTATCTGTCTTTATGATAGTCTTGGCAGTGCTGTCAAACGCTGTGGCTATATACAGTGATGCTTATGCCTTGATCAAGAAGAACAAAACTTACACATGA 2811 0.4201 MTIEGLEHKGKKTISRKNRVVADEKAPLIPKTHDADTESFDEFDGASFSGAVFNLATTAIGAGIMGLPACVKVGDGSWSSCYNLNCFSIGFIIRVSRAGNLTSYGNLVGDSFGKFGKALVQICVIINNVGMLIIYMIIIGDVISGTSSSSGIHHSGVLEGWFGVHWWTGREFVLLFTTFAVFSPLSCFKRIDSLRYTSALSFGLAVVFLVIAVGISIFKIAIGGIGMPRLFPIITDVSSVFELFTVVPVVVTAYLCHFNVHSIDNELEDSSQIHGIVRTSLALCASVYLLTSFFGFLLFGEGTLDDVLANFDTDLGIPYGSVLNDAIRFCYAAHLVLVFPVVFYAVRINLDGLVFPSARPLVLDNFRFASITVALIVAAFLGANFIPSIWDIFQFTGATAAASLAFIFPSAITLKDRYNIATKKDKILSVFMIVLAVFANVMAVYSDAFTLIKNSIMKLSGSWGVLILIVQVKMRSGSVASEAEEQKSGRNKRVVDENAPLIPKSQKSDAAGFDEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLAIILTGFLTEKSIEFMIRISRVGNLSSYGSLMGDAFGKYGKALVQICVVVNNIGVLIIYMIIIGDVISGTSSSRTHHSGVLEGWFGVHWWTGRAFVLLFATLAVFAPLVSFKRIDSLKFTSALSVGLAVVFLVIAVGISIFKIIIGGIVMPRLFPIITDAASVFELFTVVPVLVTAYICHYNVHSINNELEESSQMHGVVRTSLALCASVYLLTSFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRFSYAAHLVLVFPVVFYAVRVNLDGLMFSSSRPLRQDNFRFALITISLIGVIFVGANFIPSIWDIFQFIGATAAVCVAFIFPAAVTLRDRYNIATKTDKVLSVFMIVLAVLSNAVAIYSDAYALIKKNKTYT 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1009 936 PANTHER AMINO ACID TRANSPORTER 7 455 - -
Aed3g1009 936 PANTHER AMINO ACID TRANSPORTER 480 933 - -
Aed3g1009 936 Pfam Transmembrane amino acid transporter protein 519 923 IPR013057 -
Aed3g1009 936 Pfam Transmembrane amino acid transporter protein 46 445 IPR013057 -
Aed3g1009 936 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 455 - -
Aed3g1009 936 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 480 933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1009 Aed-Chr3 7716830 7726788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1009 494 932 Amino Acid or Auxin Permease AAAP Family AT5G38820 65.986 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1009 K14207 - gmx:100791286 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1009 3 7716830 7726788 Aed3g1009 3 7716830 7726788 ECH
Aed3g1009 3 7716830 7726788 Aed3g1009 3 7716830 7726788 PCT