Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0999 ATGGGTTCTGTTTGTTGTTGTTTCAGTTTTGATGATTTTGAAGATTATGTAAATCCAAATAGTCCTGTATATAGGAACTGTGTGTGTCTCAGTTGCTTGATACAGAACCTTTTGAGTGTGTATTCATCAATATTCCGTAGAGGTGATGCACATTCAATTCCTTCATCTATTCAAGGGGCAGCATCTATGACTACAGCAGCATCACTTGATAATTCTCTATCTGACATGTACCGCTCTCCTCCAAGGCCATTACCATATGATGCAGACTCCAGATATTTTCGCTCGCAACGTGATGGACTAGTTTCGAGGCGTGAGAAGGGTTCAAGTCATTCGAATGAGGAAACAGAACCTCTAAGAAGTGATGCTGATGTGGATCCAGAGTCTTTAAGTTCTGGAGACAAATGGAATGAAAGTGCCTGTGAAGCTGGATCCAAGGAATACCGTTCTAAGTCCTCACTAAGGCTTCAATCAGCAAAATATTTGACTGGAGTTGGCCTTGTCTATGCATCATCAGAGGAGGAGGATGTCTGCCCAACTTGTCTTGAAGAATACACTAAAGAGAATCCAAAGATAATGACAAAATGCTCTCATCATTTTCACCTTGGTTGCATTTATGAGTGGATGGAGAGAAGTGACAACTGTCCAGTTTCCGACATTTACTTCCACCCAGCTTGCCTTCAGACCTTGAGATGGTATTCGATGAAACGACTTTCACTTGATTACAAGGTCTCTGTCGTGGATGAAGTCAGCAACTGA 756 0.418 MGSVCCCFSFDDFEDYVNPNSPVYRNCVCLSCLIQNLLSVYSSIFRRGDAHSIPSSIQGAASMTTAASLDNSLSDMYRSPPRPLPYDADSRYFRSQRDGLVSRREKGSSHSNEETEPLRSDADVDPESLSSGDKWNESACEAGSKEYRSKSSLRLQSAKYLTGVGLVYASSEEEDVCPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPVSDIYFHPACLQTLRWYSMKRLSLDYKVSVVDEVSN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0999 251 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 249 - -
Aed3g0999 251 SUPERFAMILY RING/U-box 171 216 - -
Aed3g0999 251 MobiDBLite consensus disorder prediction 99 137 - -
Aed3g0999 251 SMART ring_2 177 217 IPR001841 -
Aed3g0999 251 MobiDBLite consensus disorder prediction 99 130 - -
Aed3g0999 251 ProSiteProfiles Zinc finger RING-type profile. 177 216 IPR001841 -
Aed3g0999 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 166 219 IPR013083 -
Aed3g0999 251 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 249 - -
Aed3g0999 251 Pfam RING-H2 zinc finger domain 172 216 IPR024766 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0999 Aed-Chr3 7540999 7548633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0999 1 216 C3H Transcription Factor Family AT5G15790 61.991 8.94e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0999 - - gmx:100777068 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0999 3 7540999 7548633 Aed3g0999 3 7540999 7548633 ECH