Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0992 ATGGCTTTGTTGATGGCAATTGTAGGTATAGTCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAGGTAAGGTACAGGAAGAAAGGCTTGCCTCCTGGCACAATGGGTTGGCCACTTTTTGGTGAGACAACTGAGTTTCTTAAGCAGGGTCCAAACTTCATGAAAACCCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGTTGTCCTACAATAGTGTCCATGGATCCAGAGCTTAATAGATACATCTTAATGAATGAGGCAAAAGGGCTTGTTCCTGGTTACCCTCAATCCATGTTAGATATCTTAGGCAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCTCTGCTTTCCATCATTAGCCCCACATCGATCAGAGACCAGCTTTTGCCAAAAATTGATGAGTTCATGAGAGCCCACACCAGCAATTGGGGTCACAAAGTCATCAACATTCAAGAGAAAACCAAAGAGATGGCCTTTCTCTCATCTCTGAAGCAGATTGCTGGCACAGAATCTGTCTCATTATCTGACTCATTCATGGCAGAGTTTTTTAAGCTTGTTCTAGGAACCATCTCTCTCCCTATTGACCTTCCTGGCACAAATTACCACCGTGGATTCCAGCTTTTAGAGAAAAGGAGAGCATCAAATGAAACCTACCATGACATGCTTGGTTGCTTGATGGGAAGAGATGAGAGTAGTAGATACAAACTAAGTGATGAAGAAATCATTGATCTAGTTATTACAATTATATATTCTGGCTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTACCTCCATGACCATCCCAAAGCTCTTGAAGAAGTCAGAAAAGAGCATTTGGCCATAAGAGAGAGGAAAAAGCCAGACGAACCACTTGACTGGAATGATCTCAAGTCAATGAGCTTTACTCGTGCGGTGATTTTTGAGACCTCTAGATTGGCCACAATAGTTAATGGGGTCCTAAGAAAAACCACTCAAGACATGGAACTAAACGGCTATTTGATTCCCAAAGGGTGGAGAATATATGTGTACACAAGAGAGATAAATTATGACCCTTTTCTATATCCTGATCCACTAACATTCAACCCTTGGAGATGGATGGACAAGAGTCAAGAATCAAAAAACTATTTCTTGATATTTGGTGGAGGAACCAGGCTCTGTCCAGGAAAAGAGTTGGGAATTGCAGAAATTTCCACTTTCTTACACTACTTTGTAACCAGATACAGGTGGGAGGAAGTAGGAGGAGATAAACTAATGAAATTTCCTAGAGTTCAGGCACCTAATGGACTTCACATAAGGGTGCAACATCTTACTAACTAG 1368 0.4181 MALLMAIVGIVLVLCFCSALLRWNEVRYRKKGLPPGTMGWPLFGETTEFLKQGPNFMKTQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTSIRDQLLPKIDEFMRAHTSNWGHKVINIQEKTKEMAFLSSLKQIAGTESVSLSDSFMAEFFKLVLGTISLPIDLPGTNYHRGFQLLEKRRASNETYHDMLGCLMGRDESSRYKLSDEEIIDLVITIIYSGYETVSTTSMMAVKYLHDHPKALEEVRKEHLAIRERKKPDEPLDWNDLKSMSFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWMDKSQESKNYFLIFGGGTRLCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVQAPNGLHIRVQHLTN 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0992 455 PRINTS P450 superfamily signature 403 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PRINTS P450 superfamily signature 265 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PRINTS P450 superfamily signature 394 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 Pfam Cytochrome P450 226 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 Gene3D Cytochrome P450 24 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PRINTS E-class P450 group I signature 320 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PRINTS E-class P450 group I signature 254 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PRINTS E-class P450 group I signature 393 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PRINTS E-class P450 group I signature 403 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PRINTS E-class P450 group I signature 360 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 PANTHER CYTOCHROME P450 26 5 451 - -
Aed3g0992 455 SUPERFAMILY Cytochrome P450 27 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0992 455 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 396 405 IPR017972 GO:0005506|GO:0016705
Aed3g0992 455 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0992 Aed-Chr3 7452290 7456695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0992 81 450 Cytochrome P450 AT5G38970 69.634 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0992 K09590 - gmx:100805958 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0992 3 7452290 7456695 Aed3g0992 3 7452290 7456695 PCT