Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0989 ATGAGGCTTGTCATCTCAACTCTTTGTGTTCTTGTGTTATTCTCTTATGCAGGTGCTTATGATCCTTTGGATCCAAATGGAAACGTAACAATCAAATGGGATGTCATGTCTTGGACACCAGATGGCTATGTGGCTGTGGTAACAGTTCACAACTTCCAAATGTTCCGGCACATCATGAACCCTGGATGGACCCTGGGATGGACATGGGCGAAGAAAGAAGTCATTTGGTCCATGTCAGGAGCTCAGACCACAGAACAAGGAGACTGCTCAAAGTTCAAAGGCAACATACCTCATTGCTGCAAGAAAATCCCCACAGTTGTGGACCTTCTCCCTGGTGTGCCTTACAACCAGCAATTCTCAAACTGCTGCAAGGGTGGAGTGGTTGCAGCATGGGGCCAAGATCCCTCACAAGCCATCTCTTCCTTCCAAGTGAGTGTTGGCCAAGCCGGTACCACAAACAAGACTGTTAAACTCCCCAAGAATTTCACCCTCTTGGCTCCAGGGCCAGGCTACACTTGTGGCCCTGCAAAGGTTGTTCCTTCCACCACTTTTCTTACCTCTGACAAGCGCCGCAAGACTCAAGCACTGAGAGTGACTCCAAAATTCTCAGCATGGTGGGGGTTCACACTCCAAAGAAAGACAATGAACCATTGCTGCAGTGCACTCATCACATGTGTCCAATCAGGGTCCACTGGCATGTGA 702 0.4886 MRLVISTLCVLVLFSYAGAYDPLDPNGNVTIKWDVMSWTPDGYVAVVTVHNFQMFRHIMNPGWTLGWTWAKKEVIWSMSGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSQAISSFQVSVGQAGTTNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTTFLTSDKRRKTQALRVTPKFSAWWGFTLQRKTMNHCCSALITCVQSGSTGM 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0989 233 Pfam COBRA-like protein 43 197 IPR006918 GO:0010215|GO:0031225
Aed3g0989 233 PANTHER PROTEIN COBRA 4 220 IPR006918 GO:0010215|GO:0031225
Aed3g0989 233 PANTHER COBRA-LIKE PROTEIN 4 4 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0989 Aed-Chr3 7420781 7423924 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0989 17 196 COBRA Gene Family AT5G15630 86.111 4.89e-117 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0989 - - gmx:100798678 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0989 3 7420781 7423924 Aed3g0989 3 7420781 7423924 ECH
Aed3g0263 3 1973462 1977320 Aed3g0989 3 7420781 7423924 ECH
Aed3g0989 3 7420781 7423924 Aed3g0988 3 7415696 7420465 PCT
Aed3g0989 3 7420781 7423924 Aed3g0989 3 7420781 7423924 PCT