Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0987 ATGGCCTCCGAGATTGACTGGGACAGGCTAGATAAAACAAAGTTCTATGTCGTGGGAGCAGGACTCTTTACGGGTGTTACAATGGCACTCTATCCGGTTTCTGTTGTGAAGACTAGGCTGCAGGTTGCCTCAAGGGATACGTTGGAGAGAAGTGCATTTTCTGTGGTGAGAGGGTTACTTAAAACAGATGGCATCCCTGGTTTGTATAAAGGGTTTGGTACAGTTATCACTGGTACAATTCCTGCCAGAATCTTATTCCTCACTGCCTTGGAGACAACAAAAGTGGTTTCCTTCAGGACGCTGGAGCCATTTAGACTATCTGCAACTACTCAGGCTGCCATAGCAAATGGAATTGCAGGCATGACGGCATCACTTTTTGCACAAACTGTCTTTGTTCCAATTGATGTGGTTAGCCAAAAGATGATGGTGCAAGGATTCTCAGGTCATGCCCAATATAGTGGGGGTTTGGATGTTGTTCGCAAAGTGTTAAGGTCTGATGGCATCAAGGGATTATATAGAGGATTTGGTTTATCTGTCATGACCTATGTACCATCTAATGTTGTATGGTGGGCAAGTTACGGTTCAAGTCAACGATTCTTGGGAGACAACTCCAGTGAGGAAGATACTCCTAGTTTACCAAAGATTATTTTTGCTCAGGCTGCTGGAGGGATCATTTCTGGTGTTACTGCATCCTGCATTACAGCCCCATTGGATACTATCAAGACACGGTTACAGGTGACAGGACTTGAAAATAAAATCTCTGTAAAACAAGTTGTTAAAGATTTGATCACTGAGGATGGTTGGAAAGGTTTATATAGAGGATTAGGTCCAAGACTTTTCAGCATGTCAGCTTGGGGTACTTCAATGATATTGACTTATGAATATCTGAAGCGCTTGTGTGAAAAGGATGGAAGAGGCGATTGA 924 0.4329 MASEIDWDRLDKTKFYVVGAGLFTGVTMALYPVSVVKTRLQVASRDTLERSAFSVVRGLLKTDGIPGLYKGFGTVITGTIPARILFLTALETTKVVSFRTLEPFRLSATTQAAIANGIAGMTASLFAQTVFVPIDVVSQKMMVQGFSGHAQYSGGLDVVRKVLRSDGIKGLYRGFGLSVMTYVPSNVVWWASYGSSQRFLGDNSSEEDTPSLPKIIFAQAAGGIISGVTASCITAPLDTIKTRLQVTGLENKISVKQVVKDLITEDGWKGLYRGLGPRLFSMSAWGTSMILTYEYLKRLCEKDGRGD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0987 307 SUPERFAMILY Mitochondrial carrier 8 296 IPR023395 -
Aed3g0987 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 96 IPR018108 -
Aed3g0987 307 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 2 305 - -
Aed3g0987 307 Gene3D Mitochondrial carrier domain 16 305 IPR023395 -
Aed3g0987 307 PRINTS Mitochondrial carrier protein signature 25 43 IPR002067 GO:0055085
Aed3g0987 307 PRINTS Mitochondrial carrier protein signature 120 142 IPR002067 GO:0055085
Aed3g0987 307 PRINTS Mitochondrial carrier protein signature 69 87 IPR002067 GO:0055085
Aed3g0987 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 199 IPR018108 -
Aed3g0987 307 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 2 305 - -
Aed3g0987 307 Pfam Mitochondrial carrier protein 20 95 IPR018108 -
Aed3g0987 307 Pfam Mitochondrial carrier protein 114 203 IPR018108 -
Aed3g0987 307 Pfam Mitochondrial carrier protein 217 302 IPR018108 -
Aed3g0987 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 299 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0987 Aed-Chr3 7406085 7410890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0987 5 300 Chloroplast and Mitochondria Gene Families AT5G15640 72.277 7.13e-159 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0987 K15121 - gmx:100819519 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0987 3 7406085 7410890 Aed3g0987 3 7406085 7410890 ECH
Aed3g0987 3 7406085 7410890 Aed3g0987 3 7406085 7410890 PCT