Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0985 GTCTCCTTGGGCTTTGAAGTGGGCTTTACACACCTTCAAGCGTACACCCCAGTGGACAAATTCACCATCAGTTGCGGTGTCACCGGAAAATCCTTCGACGGCGAGAGGACATGGACGGGAGACGCAGACTCAATGCTTTTATCAAACCAAGACAGCACCGTTTCTGCTAAAGCTGCAACACAATCTCCTTCAACCAATCAAGTCCCTTATACTACAGCTCGCCTTTCTCGTTCCCAATTCAGTTACTCCTTCCTCGTCACCACCGGAGGCCCCAAATTCGTTCGCCTCTTCTTCTATCCAGCTTCTTACCCTTCCTTTCCCCGCACAGACTCCTCCTTCACTGTTCAATCCAATCAATGCTTTCTCCTTCGCGGTTTCAATGCCGCTTTAAACGCTGATGCTGAAAACAAGGAAACCATCTTCAGAGAATACGTTATCTATGTGGACGATGGTCAGAGGCTTATCCTCACCTTCACTCCGTCACAACCAAACTCCTATGCTTTCATCAATGGAATTGAGGTATTTTCCATGCTAACCGACCTGTATTTTAGAAATGACCCAGAATTCAAGTTGGTGGGAACTAACACTCTATACAGCGTAGGAACCAACTTTGCACTGCAGACAGAGTATAGAATCAAAGTCGGAGGAGTTGAAATCTCGCCACTAAATGACACTGGTTTGTTCAGGAAATGGTCCGGTGATGAAGAAGATTATTTAATTAAACTAAATCCACAGAATAATGATCTACCATTTGGCATGGATGCTTTGCGCTGGAGACAGAGTATAGAATCAACGTTGGAGGACAAGAAATATCGCCACACCGGTTTGTTCAGAAAATGGGATGGTCACGATGAAGATTTTTTAATTAAACAAAATCCACAGAATAATGATCTACCAGCTGACTTAGATGGTGATATGAACATAACTGTGATTGTGAATCCTGATCATGTGGCACCCAAGGAACTGTACAGAACATCGCGTGACATGGGCACAAACGCCACTCACAACAAAATCAACAACCTAACTTGGCAGTTCCCGGTTCACCCTGGTTTCACTTATATAGTCAGGCTTCACTTTTGCGAACTTGACCCCAATATTATTGACATAAGTGATAGGGTTTTCTTCATTTATATAGCGAACCAGTTGGCTGATGATCGTGCTGATGTTATGATGTGGACCGAGAAACAGAAAGGTCTCGCTGTGTACAAAGACTATGCTGTTTTGGTTCCCCAAAGTAATACTCAGAAAAAGGTTAATCTCTCGCTGCAAATGCAGCCTCAAGCTGATTATCTAACAAAATATAGCGATGCGTTCTTGAACGGTCTTGAGATCTTCAAAATCAGCAACGCTTGGTCTAACAGCCTCTCAGAACCTAACCCAGATCTGGTTGAGACTCCACTTAGCAGAAGGCCTATCCAAAAGGTAAAGAACAAACGCAGAACACTGATAATTGGTGTAGTCACGGGGGTGGTATCCGGCGTCGTTTTGATCTCGCTTGTTGTTTACTTTATCCTGGTGTCCAAGTGGGATCCACTCTCTTTCTCAATGACCAAGTCAACCAACACCCAAAATTGTACTCCGCCATCCAATCTTTGTCGCCGCTTCACCCTCGACGAGATAAAAGCTGCCACCAAAAACTTCAACAATGTGTTCATAGTTGGTGTTGGGGGATTCGGCCATCCCTATGTTAGCACTGCTGTGAAAGGAAGCTTTGGGTATTTAGACCCCGAGTATTTTATTCGGCAGCGTTTGACAGAGAAATCTGATGTGTACTCTTTTGGGGTAGTGCTGTTTGAAATACTTTGTGCTCATTTGCCTCTGATCCACACTGCGGAGAATGAGCAGTTGTCCCTTGCTAATTGGGCCAGGTATTGTTATCAAAATGGGACCGTGACACAAATTGTGGATCCCATTTTGAAGGGGAAGATTGCGCCTGAGTGCTTCGCGAAGTTTTGTGAGATTGGGGTGAGTTGTTTGTTACATGATGGGACACAGAGGCCATCTATGAACGACGTGGTTTCAATGCTGGAGTCTGCGCTGAAACTACAAGAGAGTGCGGAGCAGCACGAACATGCTGATATTATTACCCATGGAGTTCAGGAAAAAATAGAGGAAGATGGTGATAATGTGTTTAATAGAGGAGAGCACCACCATGGTTACAAGGACAATGATGCATTGCTTGTCTGA 2187 0.4458 VSLGFEVGFTHLQAYTPVDKFTISCGVTGKSFDGERTWTGDADSMLLSNQDSTVSAKAATQSPSTNQVPYTTARLSRSQFSYSFLVTTGGPKFVRLFFYPASYPSFPRTDSSFTVQSNQCFLLRGFNAALNADAENKETIFREYVIYVDDGQRLILTFTPSQPNSYAFINGIEVFSMLTDLYFRNDPEFKLVGTNTLYSVGTNFALQTEYRIKVGGVEISPLNDTGLFRKWSGDEEDYLIKLNPQNNDLPFGMDALRWRQSIESTLEDKKYRHTGLFRKWDGHDEDFLIKQNPQNNDLPADLDGDMNITVIVNPDHVAPKELYRTSRDMGTNATHNKINNLTWQFPVHPGFTYIVRLHFCELDPNIIDISDRVFFIYIANQLADDRADVMMWTEKQKGLAVYKDYAVLVPQSNTQKKVNLSLQMQPQADYLTKYSDAFLNGLEIFKISNAWSNSLSEPNPDLVETPLSRRPIQKVKNKRRTLIIGVVTGVVSGVVLISLVVYFILVSKWDPLSFSMTKSTNTQNCTPPSNLCRRFTLDEIKAATKNFNNVFIVGVGGFGHPYVSTAVKGSFGYLDPEYFIRQRLTEKSDVYSFGVVLFEILCAHLPLIHTAENEQLSLANWARYCYQNGTVTQIVDPILKGKIAPECFAKFCEIGVSCLLHDGTQRPSMNDVVSMLESALKLQESAEQHEHADIITHGVQEKIEEDGDNVFNRGEHHHGYKDNDALLV 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0985 728 PANTHER OS07G0166700 PROTEIN 9 245 IPR045272 GO:0004714|GO:0006468
Aed3g0985 728 Gene3D - 20 178 - -
Aed3g0985 728 Gene3D - 205 448 - -
Aed3g0985 728 PANTHER OS07G0166700 PROTEIN 562 708 IPR045272 GO:0004714|GO:0006468
Aed3g0985 728 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 273 562 - -
Aed3g0985 728 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 562 708 - -
Aed3g0985 728 Pfam Malectin-like domain 276 447 IPR024788 -
Aed3g0985 728 Pfam Malectin-like domain 23 237 IPR024788 -
Aed3g0985 728 Pfam Protein tyrosine and serine/threonine kinase 568 676 IPR001245 GO:0004672|GO:0006468
Aed3g0985 728 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 9 245 - -
Aed3g0985 728 PANTHER OS07G0166700 PROTEIN 273 562 IPR045272 GO:0004714|GO:0006468
Aed3g0985 728 Gene3D Transferase(Phosphotransferase) domain 1 535 704 - -
Aed3g0985 728 SUPERFAMILY Protein kinase-like (PK-like) 561 681 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0985 Aed-Chr3 7395346 7401543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0985 560 689 Receptor kinase-like Gene Family AT3G51550 66.923 2.46e-48 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aed3g0985 Malectin_like 6.5e-18 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0985 - - gsj:114381619 633.254