Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0982 ATGAGGTTCCTCAGTACCACTTCCACAACACTCTTCCTCTTTCTCCTTCTTTCTAAACACCTCCAAGCGTACACACCAGTGGACCATTTCACCATCAGTTGCGGCACCACCGGGAGTTCCTTCGACGGCAAAAGAACATGGACAGGTGACATAGACTCAAATTTCTCATCTCATCAAAATGACACCTTTTCTGCTAATGCAACAACAGCACAATCTCTGTCCACTAATCAAGTCCCCTACGCCATAGCACGCCTGTCCCGTTCCCAATTCAATTACTCCTTTCACGTCACCGCTGGCCCGAAACTCCTTCGCCTTTTCTTCTACCCCACTGAGTACCCTTTCTTTTCCCGCATAGATGCCTCTTTCAGCGTTCAATCCAACCAATTCATACTCCTTAATGGCTTTAATGCCTCTCTAAACGCCGATGCGGAAGGCACAGAAACCATTTTCAGAGAATACGTGGTCAACGTGAATGACGGTGAAAGGCTGAACCTCAGCTTCACTCCGTCACAATCAAACTCCTATGCTTTCATCAACGGAATTGAAGTACTTTCCATGCCAAGCGATCTCTATTACACGTCAGGAAATGACACGAGATTCGTGTTCATGGGAAATTACACGCCATATAGGGTTGGAAACAGAGCTGCACTGGAGACCGTGTATAGAATCAATGTAGGAGGACAAGAAATCCAGTCACAAATTGACACCGGTTTTTTCAGGAACTGGGCTGGCCACGAAGAAAATTATTTAATTAAACAAAATCTGCAGTATAATGATCTACCAGCTGACTCGGAAGGTAGGAACATAACCGTGAATCCGGATTACGTGGCACCCCAGGAATTGTACAGAACAGCGCGTAACATGGGCATAAACGCCACTATGAACAAGATCAGCAACCTGACTTGGGAGTTCCCCGTTGACTCTGGCTTCACTTACATGATCAGGCTTCACTTTTGCGAGCTTGATTCTATTATTAATGAAGACGGTGACAGGGTGTTCTTCATTTACATAGCGAACCAATTGGCTGATGATCACGCTGATGTTATGAGATGGAGCCAGAATCAGAAAGGTCTTGCTGTGCAGAAAAACTATGCCGTTTTGGTTCCCAAGAATAATACTAAAAAAAAGGTTAATCTCTCACTTCAAATGCATCCTCAAACTGATGATAAAGCAACATACAGCGATGTATTCTTGAATGGTCTCGAGATATTCAAAATCAGCGACACCTTCTCCAACATCCTCGCCGGACCTAACCCAGACTCGGTTCAAACTCCAAAGAACAACATACCTCGCCAAAAGGGAAAGAGTAGCAGCTTAAGTAGAATGAAGATAATTGGTGTCATCACAGGGCCGAGGATGTTCATCATATACGTGGGAAACAAGTTGGGTCATCATCCCACTGATGTTATGACATGGAGTCACAAACATAAAGGTCTCGCCATTTACAAAGACTACCGTGTTTTACTTCCCAGGAATGATGCTCAGATTAATCTATTGATCCAAAATTTCCCTTATGAAAGTCCTAATGATACCAGTTATAGCAACCCCTTCTTGAATGGCATTGAGATCATCAAAATCAATCACCCACAACGCATCATCGTCTCAGAGGAAAAGAGCAACAACAAAGATGGAATTTTGATACTTCAAGTCGTCGGGGGGGTGGTATCTGGCATCCTTTTCGCCTCTTATTTTGTTATTGTGATTTTGATGTGGGCGATTTCTGATCCAATCTCTGAGTCAACCAACAAGTACAACTTTTGGCAACCACCTGACCTCTGTCGCCGCTTCTCCCTCGTCGAGATCAAAGCTGCCACCAACAACTTCGAGGAAACTTTCATAGTTGGTGGAAGCTTTGGGTATTTAGACCCAGAAAATTATAATCGACAACGTTTCACGGAGAAGTCTGATGTGTACTCTTTTGGTGTAGTACTTTTTGAGATATTGTGTGCTCGGCCGCCTCTAATCCACACTGCAGAGATGCAACAAGTTTCACTAGCTAATTGGGTTAGATACTGTTACCAAAGTGGAACCATGACACAAATTGTGGACCCTACATTGAAGGGAAGTATCGCACCCAACTGCTTGAGAAAGTTTTGTGAGATTGGGATGAGTTGCTTGTCAGAGGATGGGGCACAAAGGCCATCAATGAGCGACGTCATTTCCGATCTAGAGTTTGTGCTACAACTGCAAGAAAATGCATAG 2202 0.441 MRFLSTTSTTLFLFLLLSKHLQAYTPVDHFTISCGTTGSSFDGKRTWTGDIDSNFSSHQNDTFSANATTAQSLSTNQVPYAIARLSRSQFNYSFHVTAGPKLLRLFFYPTEYPFFSRIDASFSVQSNQFILLNGFNASLNADAEGTETIFREYVVNVNDGERLNLSFTPSQSNSYAFINGIEVLSMPSDLYYTSGNDTRFVFMGNYTPYRVGNRAALETVYRINVGGQEIQSQIDTGFFRNWAGHEENYLIKQNLQYNDLPADSEGRNITVNPDYVAPQELYRTARNMGINATMNKISNLTWEFPVDSGFTYMIRLHFCELDSIINEDGDRVFFIYIANQLADDHADVMRWSQNQKGLAVQKNYAVLVPKNNTKKKVNLSLQMHPQTDDKATYSDVFLNGLEIFKISDTFSNILAGPNPDSVQTPKNNIPRQKGKSSSLSRMKIIGVITGPRMFIIYVGNKLGHHPTDVMTWSHKHKGLAIYKDYRVLLPRNDAQINLLIQNFPYESPNDTSYSNPFLNGIEIIKINHPQRIIVSEEKSNNKDGILILQVVGGVVSGILFASYFVIVILMWAISDPISESTNKYNFWQPPDLCRRFSLVEIKAATNNFEETFIVGGSFGYLDPENYNRQRFTEKSDVYSFGVVLFEILCARPPLIHTAEMQQVSLANWVRYCYQSGTMTQIVDPTLKGSIAPNCLRKFCEIGMSCLSEDGAQRPSMSDVISDLEFVLQLQENA 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0982 733 MobiDBLite consensus disorder prediction 417 437 - -
Aed3g0982 733 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 614 731 - -
Aed3g0982 733 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 449 619 - -
Aed3g0982 733 SUPERFAMILY Protein kinase-like (PK-like) 609 722 IPR011009 -
Aed3g0982 733 Pfam Protein tyrosine and serine/threonine kinase 619 723 IPR001245 GO:0004672|GO:0006468
Aed3g0982 733 PANTHER OS07G0166700 PROTEIN 614 731 IPR045272 GO:0004714|GO:0006468
Aed3g0982 733 PANTHER OS07G0166700 PROTEIN 449 619 IPR045272 GO:0004714|GO:0006468
Aed3g0982 733 PANTHER OS07G0166700 PROTEIN 22 433 IPR045272 GO:0004714|GO:0006468
Aed3g0982 733 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 22 433 - -
Aed3g0982 733 Gene3D - 29 187 - -
Aed3g0982 733 Gene3D - 215 407 - -
Aed3g0982 733 Pfam Malectin-like domain 32 406 IPR024788 -
Aed3g0982 733 Gene3D Transferase(Phosphotransferase) domain 1 558 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0982 Aed-Chr3 7373805 7376972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0982 596 733 Receptor kinase-like Gene Family AT3G51550 56.522 4.38e-44 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aed3g0982 Malectin_like 6.6e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0982 - - gmx:100799780 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0982 3 7373805 7376972 Aed3g0982 3 7373805 7376972 ECH
Aed3g0278 3 2062361 2064850 Aed3g0982 3 7373805 7376972 PCT