Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0978 ATGATATTAACCGTGAGGTTCAACGGTGTCACCTCCATCGCACTCACCATTCTCTTTCTCTCCGTACAACACCTCCAAGCGTACACCCCAGTGGAAAGCTTCACACTCAGCTGCGGCACCACCGGGAGTTCCTTTGATGGAGAAAGAACATGGTCTGGCGACACAGACTCCAAGCTCTTAGTGTCTCGTCAAGACGACAGCGTTTCAGATAAGCCAACAACACAAATACCTTCTTCTATCAACCCAGTACCCTACTCTACAGCACGCTTGTCCCGTTCCCAATTCAATTACTCCGTCCCCGTCTCTGCTGGCCCTAAATTCGTTCGTCTCTTCTTCTACCCTGCTCAATACCCTTCTTTTCCCCGCAACGATGCATCCTTTACTGTCCAAGCCAACGGATTCACACTCCTCAACGGTTTCAACGCCTCTGTAAATGCTGACGTGGAAGGCACCCCAACCATATTCAGAGAATATGTGGTGTACGTCAACGATGGTGAGATTCTGATCCTCAGCTTCACTCCGTCCTCGCAGCAACCAAACTCCTACGCTTTCATCAACGGAATTGAAGTCTTGTCCATGCCTAGTGATCTGTATTACACGCCAGCAAATGACACAATAGGATTCACGTTCGTGGGACATAACACGCAGTACAGCGTTCTAACCAGCACTGCGCTGGAGACAGAGTACAGAATCAAAATGGGAGGGCAGGAAATCTCGCCAAAAGAAGACACTGGTTTGTTCAGGAACTGGTCCGGGGACGAAGAAGATTATTTAATTAAAAATAATGATCTAGCAGCCAACACGGATGGTAAGATGAACATAACCGTGGTTCCTGATTACGTGGCACCCAAGGAACTCTACAGAACAGCGCGTAACATGGGCACAAACACCACTTTTAACAAAATCAACAACCTGACTTGGGAGTTCCCCGTTGATCCTGGCTTCATTTATGTGCTCAGGCTTCACTTTTGCGAGCTTGACCCCAATATTAATGAAGACAGTGAAAGGGTGTTCTTGATTTACATAGTGAGCCAGTTGGCCGACGACCACGTCGATGTTATGAAGTTGAGCAGAAATCAGAGAGGTCTCGCTGTGCAGAAAAGCTATGCCGTTTTGATTCCTAAGACTGATAATGCTCAGAAAAAGTTTAATCTCTCGCTTCAGATGCATCCTTATGCAACTGATGATAAAACAACATACAGCGATGCATTCTTGAACGGGATCGAGATCTTCAAAGTCAGCAACGCCGGGTCAAACAACCTCGCCGGACCTAACCCGGACCCGCTTCAGACTCCACAAAACAACATACCCGTCGTCCCGAAAGGAAAGAGCAGCAACAAAAACGGAACGACGCTAATTGGCATCGTCGCAGGGGTCGTATCTGGAGTCGTTTTGATCTCGCTTGTCATTTTCTTTGTCTTTTTGTCTGTGACCTCCAAGTGTGGTCCACTCTTGTTCTCAATGACCAAGTCAGCCAACACACATAATTCCTCCCTGCCTTTAGATCTCTGCCGCCGCTTCTCCCTTGCTGAGATTATAGCCGCCACCCAAAACTTCGACGATATCTTCATCGTCGGTGTCGGGGGATTTGGACACGTCTACAAGGGCTACATCGATGATGAAGATGGAACACAGAGGCCGTCGATAAACGATGTCGTTTGGCTGCTCGAGTTTGCATTGCAGCTGCAAGAGAATGCCGAGCAGCGTGAAAATGCTGGTTTGGTTACAAATGAAGCCAGTGAAAAAAAAGACGAAACAAGTGACTGTTGGGATACTGAGGCCAACCATGAACACATCGTTTGGATGCTACAATTTGTGCTGCATGAGCAAGAGAGTGCTGAGAAGCCCAAAAGTGCTGGTATTGTTATTGAGCTTAGTAGCAAACTAAGAGCTAGCAATGATATTAACCGTGAGGTTCAAAGTGTCACCTTCCTCGCACTCACCGTTCTCTTTCTCTCCATACACCTCCAAGCATATAAACCAGTGGATCATTTCACCATCAGTTGCGGCACCACCGGAAAATCTTTCGACGGTGAAAGGACATGGACGGGAGACACAGACTCAAACCTCTTATTGCGGCAAGACGATACCATTTCTGCTAATGCAACAACACAATCTTCTTCCTCAAACCAAGCCCCCTTCACCACAGCACGCTTGTCCCGTTCTCAATTCAATTATTCCTTTCCCGTCACTGCAGGTCCTAAATTCCTTCGCCTCTTCTTCCACCCTGCCTCTTACGCTTCTTTTCCATGTACCGACTCTTCCTTCGCTGTTCAATCCAACCAATTCACCCTCCTGAATGGTTTCAACCCCTTTTTAAACGCCGACGATGAGAAGAACACGGAAACCATCTTCAAAGAATACGTCATCTGGGTGGACAACGGTCAGAGGCGGCTTAACCTCAGCTTTATTCCGACAAAACCAAACTCCTATGCTTTCATTAACGGAATTGAAGTCGTGTCCATGCCAAGTAATCTGTATTACACATCAGCAAATGACGTGGGATTCACGTTCGTGGGACATAACACGCTGTACACCGTTGGAAATAGCGTTGCGATGGAGACAGAGTATAGAATTAGAGTTGGATGGGAAAGAATCTCGCCAAGAGACGACACTGGTTTGTTCAGGAACTGGGCTGGCCACGATGAATATTACTTAATGACACAGAATCTAATGCCTGTAAAAGGTGCCCCAGATTGTGTCAACATAACCGTGAATCCTGATTATGTGGCTCCTAAAGAACTTTACGAAATAGCACGCGACATGAGCACAAACAATACTCTGAACAAAATCAGCAACTTGACTTGGGAGTTCCCTGTTGACTCTGGTTTCACTTACATGCTTAGGCTCCACTTTTGTGAGTTTGTGGCTGAAATTACTGACATTAGTGACAGAGTATTCTTCATTTACATAGCGAGCCAGTTGGCTGATAGTCGCGCTGATGTTATGAGATGGACTCAAAAACAGAAAGGTCTTGCAGTGTACAAAGACTATGCCATTTTGATTCTCAAGAATAATACTCAGAAAAAGGTTAATCTCTCGCTCCAACTTCATCCCCATACGATGCATACGCGATACAGTGACCCGTTTTTGAACGGTCTTGAGATATTCAAAATCAGCGAGGCCGGATCTAACATCCTTGACTATCCGATTCAAACTCAACATATCAAAATACCCATCCCAAAGGGAAAGGGTAGCAGTGTTAGCCAAACGATCATAATTGGTGTCATGGCAGGGGTGGCATGCGTCGTTTTGATCTCCTTTGTTGTTTTTTTCTTTTTGTCTACGACTTCCATGTGCAATCCACTCTTGTTCTCAACGTCCAAGTCATCCAACATGCATTCCTCCCTGCCTTCGGATCTCTGCCGCCGCTTTTCCCTTGTTGAGATAATAGCTGCCACCCAAAACTTCAACGACATCTTCATTATCGGTTTCCATGTCAGCACCGATGTGAAAGGTAGCTTTGGGTATTTAGATCCGGAGTATTATAAACGGTACCGTTTGACGGAGAAGTCTGATGTGTACGCTTTCGGAGTAGTTCTGTTTGAGATATTATGCGCTCGGCCGCCTTTGAACCGTAATGCAGAGACAAAACAAATGTCGCTTGCTAATTTTGCCAAGCACTGTTATGAAAATGGCACCATGGCACAGATTGTGGATCCCAAGTTGAAGGGGACGATCGCACCTGAGTGCTTCAAGAAGTTTTGTGAGACTGGGATGAGTTGTTTGTTAGAAGATGGAACACAGAGGCCGTCGGTAAACGACGTTGTCTGGCTGCTTGAGTTTGCGCTGCAGCTGCAAGAGAGTGCGGAGCAGCGCCACAATGCTGGTATTGCTACAGATGAAGTCAATGAAAAAAAAGAGGAAATTGGTGACTGTATGTTTAGTAATGCAGCAGAGCACAACTATGGTTGCAAGGATAGTGGTACATTGCTCGTATGA 3942 0.4625 MILTVRFNGVTSIALTILFLSVQHLQAYTPVESFTLSCGTTGSSFDGERTWSGDTDSKLLVSRQDDSVSDKPTTQIPSSINPVPYSTARLSRSQFNYSVPVSAGPKFVRLFFYPAQYPSFPRNDASFTVQANGFTLLNGFNASVNADVEGTPTIFREYVVYVNDGEILILSFTPSSQQPNSYAFINGIEVLSMPSDLYYTPANDTIGFTFVGHNTQYSVLTSTALETEYRIKMGGQEISPKEDTGLFRNWSGDEEDYLIKNNDLAANTDGKMNITVVPDYVAPKELYRTARNMGTNTTFNKINNLTWEFPVDPGFIYVLRLHFCELDPNINEDSERVFLIYIVSQLADDHVDVMKLSRNQRGLAVQKSYAVLIPKTDNAQKKFNLSLQMHPYATDDKTTYSDAFLNGIEIFKVSNAGSNNLAGPNPDPLQTPQNNIPVVPKGKSSNKNGTTLIGIVAGVVSGVVLISLVIFFVFLSVTSKCGPLLFSMTKSANTHNSSLPLDLCRRFSLAEIIAATQNFDDIFIVGVGGFGHVYKGYIDDEDGTQRPSINDVVWLLEFALQLQENAEQRENAGLVTNEASEKKDETSDCWDTEANHEHIVWMLQFVLHEQESAEKPKSAGIVIELSSKLRASNDINREVQSVTFLALTVLFLSIHLQAYKPVDHFTISCGTTGKSFDGERTWTGDTDSNLLLRQDDTISANATTQSSSSNQAPFTTARLSRSQFNYSFPVTAGPKFLRLFFHPASYASFPCTDSSFAVQSNQFTLLNGFNPFLNADDEKNTETIFKEYVIWVDNGQRRLNLSFIPTKPNSYAFINGIEVVSMPSNLYYTSANDVGFTFVGHNTLYTVGNSVAMETEYRIRVGWERISPRDDTGLFRNWAGHDEYYLMTQNLMPVKGAPDCVNITVNPDYVAPKELYEIARDMSTNNTLNKISNLTWEFPVDSGFTYMLRLHFCEFVAEITDISDRVFFIYIASQLADSRADVMRWTQKQKGLAVYKDYAILILKNNTQKKVNLSLQLHPHTMHTRYSDPFLNGLEIFKISEAGSNILDYPIQTQHIKIPIPKGKGSSVSQTIIIGVMAGVACVVLISFVVFFFLSTTSMCNPLLFSTSKSSNMHSSLPSDLCRRFSLVEIIAATQNFNDIFIIGFHVSTDVKGSFGYLDPEYYKRYRLTEKSDVYAFGVVLFEILCARPPLNRNAETKQMSLANFAKHCYENGTMAQIVDPKLKGTIAPECFKKFCETGMSCLLEDGTQRPSVNDVVWLLEFALQLQESAEQRHNAGIATDEVNEKKEEIGDCMFSNAAEHNYGCKDSGTLLV 1313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0978 1313 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 18 539 - -
Aed3g0978 1313 SUPERFAMILY Protein kinase-like (PK-like) 1146 1262 IPR011009 -
Aed3g0978 1313 Pfam Malectin-like domain 667 1039 IPR024788 -
Aed3g0978 1313 Pfam Malectin-like domain 36 413 IPR024788 -
Aed3g0978 1313 PANTHER OS07G0166700 PROTEIN 1146 1285 IPR045272 GO:0004714|GO:0006468
Aed3g0978 1313 PANTHER OS07G0166700 PROTEIN 541 578 IPR045272 GO:0004714|GO:0006468
Aed3g0978 1313 ProSitePatterns Peroxidases active site signature. 733 744 IPR019794 GO:0004601
Aed3g0978 1313 Pfam Protein tyrosine and serine/threonine kinase 1150 1257 IPR001245 GO:0004672|GO:0006468
Aed3g0978 1313 PANTHER OS07G0166700 PROTEIN 18 539 IPR045272 GO:0004714|GO:0006468
Aed3g0978 1313 PANTHER OS07G0166700 PROTEIN 648 1144 IPR045272 GO:0004714|GO:0006468
Aed3g0978 1313 Gene3D Phosphorylase Kinase; domain 1 489 613 - -
Aed3g0978 1313 Gene3D - 33 194 - -
Aed3g0978 1313 Gene3D - 224 415 - -
Aed3g0978 1313 Gene3D - 851 1040 - -
Aed3g0978 1313 Gene3D - 664 823 - -
Aed3g0978 1313 Gene3D Transferase(Phosphotransferase) domain 1 1125 1288 - -
Aed3g0978 1313 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 1146 1285 - -
Aed3g0978 1313 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 648 1144 - -
Aed3g0978 1313 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 541 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0978 Aed-Chr3 7333257 7340833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0978 28 549 Receptor kinase-like Gene Family AT3G51550 38.980 9.12e-93 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aed3g0978 Malectin_like 5.2e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0978 - - gsj:114381619 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0978 3 7333257 7340833 Aed3g0978 3 7333257 7340833 ECH