Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0968 ATGTCTAAAAAGGTTTTGACATCAATGAAGGATGAAAATCCAGAATTGCAGAAGCAAATTGGGTGCATCAGTGGGTTTTTTCAGCTGTTTGACCGCCACAGGTTCCTCACAGGCCAACAACGGAGTAGCAGCAGCCACAATCAGAACATTGTTGCAGCAACTAAAGGTGGAATCAGCAACCATATCAAAGAGGTGAATGATACAACTCAAAAGGCAACGGCAAATAATGTGAAGGTTGCAAGAGAGAATCAACAATCCTCCACAGAATCATCAGGAACTTCAATGTCTTCATCGTCTCGTTCGTCGAGCATGTCCTCCCTCGAGTTCAACAGAACAATTCAGATAGAGCAGTCGCTGCCGCCACCACCATCATCAATCAGTAGTCAAATGAAAGTTCCAGAAAACTCAAACAATTCAGGAAAAGGCCTTGATTTCTATGATATCGTCAAAGAGTCAATGCAGAGAGATGTTCATGGTTTGTCAGCAGTAAAAACTGCAGCAGCTAAGGAGGAAAAGAAGGGCCGCATCTTGAAACACATCGACTCTCCGAGGCCGCCGCCGCCGTCGAAATCCGCTTGGGATTCGCCAAGACTCTCTTATGATGGGAGGGACAGATTCAAATCCGCTGCGAAGACGAAGGAACTCCCAAGGCTTTCCTTGGACAGCAAGCAAGGATCTATCAATGAAGGAACAACACAACCTCGCACAATGTTAGAGCCAGAAGCTTCTAGAAGATCATCCAGCGTTGTGGCAAGGTTAATGGGACTAGAAACTTGTGATACTCCTGCAGATGATGAGTACAAGAAAACAATGAAGGGTTCTTCTGCATTGCATCAGTTTAGGAGGGATGCTTCAATCATGAACGTGACGACGCCGCATTCGCGGTTTTCTCAGGAACCAATTCCATGGAGAAGTGAATCTTCTTCAACAAAAGCGTCAAATCTGTCCCTCTCTGTGTATGGGGAAATTGAAAAGAGGGTCGCGGAACTAGAGTTCAAAAACTCTGGAAAAGATCTCAGGGCACTTAAACAGATACTTGACGCAATGCAGAGATATAAAGAGTCGTTTGATGTTACTACGAGAGATCAGGTTTCGTCTAATTCTCTGTCTGACAATAGGAGTAACAGCAGTCTCAGTGAAAGCTCGATGGTAAAAAGCCCAAGAATACGCCAGAAGGATCCATCACATTCAACCCAAGGTGGTAGTAAGTCGCAGATTTTCATCATGAAATCAGCAAAAGCAGCAAGAAAAAACGATAGTACAGCAAAGGATGTTGGTCCAGCAATTAGACATGCCAAGGATGATAAGAGTAAGAAAACGAGCACTTCAAAATTGATGCAATCCTCGAAAGTTCGTCAAGTAATCATCAATGGAGAGAATGCAAGCAATACAACAGAGGCGAGGAGCCCGAGACTACAGAAGAAGTTTGGTTTGGAGAGGCGTTCGCCATCGAATTCGAGCAGCGGTAGTAACAGAAGACAAAACAACAATAGGCCATCGGTGGAATTGTCTTCACCAAGTACAACACCAAGACAAAAATTCAGTGAGATCAGCAATCAAAGGAGGAATTTTAAGCATGAAGTTGGCGTAGAAGTCATTCACGTTGATCATTACTCTGATAGGATCAATGGTAACTCCATCCAGCTAAAGGGCATGAACCAAAATAATGATGCTGAAGTGTTGAGCAAGGAAAGTTTTATGGCTGAGAAAACAATTACAGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTTCTTTCTACAGAGAAGAACCGCCTTCTCCGGTTAAAAAGAAATCAGATATCTCAAAAGATTTAGATGATGATGCTCTGAACAGTTATGAGAGTAGTGAGGAGAGCTCAGAAGATCTTCTGCTTTCATCCAACACTGCAAAAGCCAACTTCAGCAGTGGAATCAGTGATACAGATTTGAGAACTCAAAATTTAGTCCAAATAGACTACAATGATGAGAGATTCACCAATTTCAGAGATGATAAAGATCCTGACCATAAATATATATCAGAAATACTGTTAGCTTCAGGGCTGCTCAGCAGTACAAGTTCTTGCCAGGTTTTTCATTCATCGAGTTTCCCGATAAACCCGAAGTTGTTCCTTGCACTGGAGCAAATCAAGACAAACAAGATGTGTTTCAATATTGAACATAATGCCAAGAAGATTGTTGGGCTGAGTAGTCCTGAGCTAATGCAAAGAAAGCTAATATTTGATGTTGTTAGCGACATTCTAGCTCAGAAAATAGTATTGGAAAGTTCTACTTTTTGGTGCAAACCAAATCAGTCAGCAGGTAGAAAACTAAGAGGGAAGCTTCTTCTGGATGAGCTTTGCACAGAAATTGATAAGTTACAACATAAAAATAGGAATGTCAATCTGGCTGATGAGGATGAGAATTTGACAAGTCTTCTGTGGGAAGAATTGATGCAATGTCCAACAATTTACACAAAAAGTTACTCTGAAATACCAAATGTTGTGTTGGATATTGAACGGTTGATCTTCAAGGATTTGATAACTGAAGTTGTGAGAAGTGAACTAGCTAACCAATCTGTCATCTTTTCTGGTCTTTTATTGCAAACCATAGAAAGAGCTCAAATGCTCAAGTTAAGGCTTCTAATTAGAAAGAAGCTCTGTCTGCTCTTGAATTCACACTGTGTGTGGTTTTCACAGCTTCAGTTGCTGAAGCAAATGTCTGTCTTCAACAAGATTTTTCCACAACAGGGTGTGCTGCTGAAGCTGCATCAATGA 2757 0.4175 MSKKVLTSMKDENPELQKQIGCISGFFQLFDRHRFLTGQQRSSSSHNQNIVAATKGGISNHIKEVNDTTQKATANNVKVARENQQSSTESSGTSMSSSSRSSSMSSLEFNRTIQIEQSLPPPPSSISSQMKVPENSNNSGKGLDFYDIVKESMQRDVHGLSAVKTAAAKEEKKGRILKHIDSPRPPPPSKSAWDSPRLSYDGRDRFKSAAKTKELPRLSLDSKQGSINEGTTQPRTMLEPEASRRSSSVVARLMGLETCDTPADDEYKKTMKGSSALHQFRRDASIMNVTTPHSRFSQEPIPWRSESSSTKASNLSLSVYGEIEKRVAELEFKNSGKDLRALKQILDAMQRYKESFDVTTRDQVSSNSLSDNRSNSSLSESSMVKSPRIRQKDPSHSTQGGSKSQIFIMKSAKAARKNDSTAKDVGPAIRHAKDDKSKKTSTSKLMQSSKVRQVIINGENASNTTEARSPRLQKKFGLERRSPSNSSSGSNRRQNNNRPSVELSSPSTTPRQKFSEISNQRRNFKHEVGVEVIHVDHYSDRINGNSIQLKGMNQNNDAEVLSKESFMAEKTITAEQPSPVSVLDASFYREEPPSPVKKKSDISKDLDDDALNSYESSEESSEDLLLSSNTAKANFSSGISDTDLRTQNLVQIDYNDERFTNFRDDKDPDHKYISEILLASGLLSSTSSCQVFHSSSFPINPKLFLALEQIKTNKMCFNIEHNAKKIVGLSSPELMQRKLIFDVVSDILAQKIVLESSTFWCKPNQSAGRKLRGKLLLDELCTEIDKLQHKNRNVNLADEDENLTSLLWEELMQCPTIYTKSYSEIPNVVLDIERLIFKDLITEVVRSELANQSVIFSGLLLQTIERAQMLKLRLLIRKKLCLLLNSHCVWFSQLQLLKQMSVFNKIFPQQGVLLKLHQ 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0968 918 MobiDBLite consensus disorder prediction 197 218 - -
Aed3g0968 918 Coils Coil 777 797 - -
Aed3g0968 918 MobiDBLite consensus disorder prediction 442 470 - -
Aed3g0968 918 PANTHER LONGIFOLIA PROTEIN 420 854 - -
Aed3g0968 918 PANTHER LONGIFOLIA PROTEIN 1 258 - -
Aed3g0968 918 PANTHER LONGIFOLIA PROTEIN 267 422 IPR033334 GO:0051513
Aed3g0968 918 PANTHER LONGIFOLIA PROTEIN 1 258 IPR033334 GO:0051513
Aed3g0968 918 MobiDBLite consensus disorder prediction 219 243 - -
Aed3g0968 918 MobiDBLite consensus disorder prediction 357 520 - -
Aed3g0968 918 MobiDBLite consensus disorder prediction 416 441 - -
Aed3g0968 918 MobiDBLite consensus disorder prediction 165 180 - -
Aed3g0968 918 MobiDBLite consensus disorder prediction 359 385 - -
Aed3g0968 918 MobiDBLite consensus disorder prediction 165 247 - -
Aed3g0968 918 MobiDBLite consensus disorder prediction 479 517 - -
Aed3g0968 918 MobiDBLite consensus disorder prediction 71 140 - -
Aed3g0968 918 Pfam Domain of unknown function (DUF4378) 669 843 IPR025486 -
Aed3g0968 918 PANTHER LONGIFOLIA PROTEIN 420 854 IPR033334 GO:0051513
Aed3g0968 918 PANTHER LONGIFOLIA PROTEIN 267 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0968 Aed-Chr3 7243297 7249101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0968 1 858 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.286 3.04e-75 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0968 - - gmx:100793602 1086.63