Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0937 ATGGCAGAACCGTCCACCGCCGCCGCCCCTCCGCCGCTGGTGACCAAAAGCTGGGCCGACGAAGCGGACGAAGAAACCAACGCCTCCACCACCGAGGCGGAAACCAACTCCTCCTCCACCTCCGTCGCCGCCGCCGCCGAGGCAGAAGCCTCCTCCGTGAACCTCGAATCTTTAACCATCGACGACAAAGAAAAGAACCCTTCCAAACTCTTAGACGACCCCGATGATTCTAATATCCAAGCGGTTACTTCTGGCGACACACCGTACACCTCGGCGGCGAGGTTCGAGGACCTGAGCCTCTCGCCGGAGCTTCTGAAGGGGCTCTACGTGGAAATGAAGTTCGAGAAGCCGAGCAAGATCCAGGCTATAAGCTTGCCGATGATCCTGAGCTCGCCGCACCGCGACTTGATCGCGCAGGCGCACAATGGCTCCGGGAAGACCACTTGCTTCGTGCTCGGGATGCTCAGCCGTGTCGATCCGAAGGTGCAGGCGCCGCAGGCTCTCTGCATCTGCCCCACGCGGGAGCTAGCGATTCAGAACATCGAGGTGCTCCGCCGGATGGGGAAGTATACCGGGATCGCATCCGAGTGCCTTGTGCCGACGGACCGGGACGCGGTTCATATATCAAAGAGGGCGCCTGTTATGGCGCAGGTGGTGATTGGGACTCCGGGGACAATCAAGAAGTTCATTAGCTTCAGGAAACTTGGGACCAATCGGTTGAAGATTCTTGTTTTTGATGAGGCTGATCAAATGCTTGCTGAGGATGGATTTAAAGATGATTCCCTGAGGATAATGAAAGATATAGAAAAAGATAATTCTAAGTGTCAGGTTCTTCTGTTTTCTGCTACATTTAATGACACCGTCAAGAGTTTCGTTTCAAGGACAGTCAGGACGGACCATAATAAACTCTTTGTAAAGAAAGAAGATCTATCTTTAGATGCAGTGAAGCAATATAAAGTGTATTGTCCTAATGAACTTGCTAAGATTGAAGTGATAAAAGATTACATATTTGAAATAGGAGAGAATGTGGGGCAAACCATTATATTTGTGCGCACAAAAGAGAGTGCAAAAATGTTGCATCAAGCACTTGTTAATTTGGGCTATGAGGTTACATCTATACAAGGTTCTCTTAGTACTGAAGAGAGAGACAAAGTTGTCAAGGAGTTCAGAGATGGCTTGACTCAAGTTCTTATATCAACAGATGTTCTTTCTCGTGGCTTTGATCAGCAACAGATTAATTTGGTCATCAATTATGATCTTCCAAAGAAATATGGTGTACCTGAGCCAGACTATGAAGTGTATTTACACAGGGTTGGCAGAGCTGGGCGTTTTGGGCGCAAGGGGGCTGTATTTAACCTGATATGTGATGAAAGGGATGAAAGGCTCATGGCGAAGATTGAGAACCATTTTGGCACTCATGTAACTGAGGTGCGAGCACAAAGTGTTGAAGAATATAAAGCTGCTCTCAAGGAAGCCGGTTTACTGCAATGA 1491 0.4883 MAEPSTAAAPPPLVTKSWADEADEETNASTTEAETNSSSTSVAAAAEAEASSVNLESLTIDDKEKNPSKLLDDPDDSNIQAVTSGDTPYTSAARFEDLSLSPELLKGLYVEMKFEKPSKIQAISLPMILSSPHRDLIAQAHNGSGKTTCFVLGMLSRVDPKVQAPQALCICPTRELAIQNIEVLRRMGKYTGIASECLVPTDRDAVHISKRAPVMAQVVIGTPGTIKKFISFRKLGTNRLKILVFDEADQMLAEDGFKDDSLRIMKDIEKDNSKCQVLLFSATFNDTVKSFVSRTVRTDHNKLFVKKEDLSLDAVKQYKVYCPNELAKIEVIKDYIFEIGENVGQTIIFVRTKESAKMLHQALVNLGYEVTSIQGSLSTEERDKVVKEFRDGLTQVLISTDVLSRGFDQQQINLVINYDLPKKYGVPEPDYEVYLHRVGRAGRFGRKGAVFNLICDERDERLMAKIENHFGTHVTEVRAQSVEEYKAALKEAGLLQ 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0937 496 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 331 486 IPR001650 -
Aed3g0937 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 464 IPR027417 -
Aed3g0937 496 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 93 122 IPR014014 GO:0003724
Aed3g0937 496 Gene3D - 72 309 IPR027417 -
Aed3g0937 496 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 127 302 IPR014001 -
Aed3g0937 496 SMART ultradead3 113 318 IPR014001 -
Aed3g0937 496 PANTHER DEAD-BOX HELICASE DBP80 72 475 - -
Aed3g0937 496 CDD DEADc_DDX19_DDX25 100 296 - -
Aed3g0937 496 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 72 475 - -
Aed3g0937 496 Gene3D - 312 489 IPR027417 -
Aed3g0937 496 MobiDBLite consensus disorder prediction 1 85 - -
Aed3g0937 496 SMART helicmild6 357 445 IPR001650 -
Aed3g0937 496 CDD SF2_C_DEAD 315 454 - -
Aed3g0937 496 Pfam Helicase conserved C-terminal domain 328 445 IPR001650 -
Aed3g0937 496 MobiDBLite consensus disorder prediction 29 57 - -
Aed3g0937 496 Pfam DEAD/DEAH box helicase 119 290 IPR011545 GO:0003676|GO:0005524
Aed3g0937 496 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0937 Aed-Chr3 6881344 6886868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0937 75 477 Eukaryotic Initiation Factors Gene Family AT3G19760 35.732 5.70e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0937 K18655 - gmx:100778091 822.387