Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0921 ATGGCAAGGAAGAGAAAGGTTGCTTCCTCAGCAGTGGAAGAGGGAAACCTATGTGATGGAAGCAGCATGGGTTGGGATGAGATGATGAAACAAGCTGCAGCACTTGGAGGGGTGCAAAGAGCAAGGAAGAGGTTTGTTGGTGTAAGGCAAAGGCCATCAGGTAGATGGGTGGCTGAGATCAAAGACACCATTCAGAAGATAAGAGTGTGGTTAGGAACCTTTGACACTGCTGAGGAAGCTGCAAGAGCCTATGATGAGGCTGCTTGCTTGCTTCGTGGCGCGAACACGAGGACTAACTTCTGGCCTTGCTCTCAATCCTCCACAACTCCAGCTCTTTCCTCAAAGATCACCAATCTCCTCCTTCAAAGGCTTAAAGAAAGAAACAACAACAACACTTGCTCCTCTACCTCTATTCTTGTCAACAACCAACATATGCAACAACAAGTTGATAATGCATATTATGGAGAAGGAGAAGGATCATCAACACAATTCTCAATTGACCAATTCACTGATTTCCTCAATGAGCCTGAAGATTATAGCACAAGCAACAACGACTTCATCAACAACACTGCACAGATTGACTACATCACTAGTAGCTTTGAGTCATGCTTAACTGAGAAAGATGTGCAATACAAATCCAGTGACGACGTGACACCGCAGACTTCAAGCAATGACAGCAACTCAGGAGTGGAGGAGAGTGAAGAAGAAAGCACTGATTTGGGTGTCCAGAGTAGTACTAATTTGGATGTTCATGATTTTAGATTTTTGGACAACATTGCTCCTCCTAGTTACTATTCTCCTTTTGAGATTGCTGAAGAGATAAAGGAGGAGGAGGAGGAGCCGGAGAATGAGAACTATGGCAACGAGCCTTCAATGCTTCGAGATGTGATGAAGAGAATGACTTATGAGAGGAAGTTCTCAGCTTCTCTCTATGCATTCAATGGAATACCTGAATGCTTGAAGTTGAAACTTGAATCAGGACTAGCTGATCAATTAACCAGCCTTCAAATGGCTTGTAGCAAAAACAACAAACACGAGAAGAAGAACAAGGAAGAACAAGAAGAACATCACCAACAACAAACATCACCTGACATGGATTCTTCTAGTGTTGATGGAGAACTGTTACTTTGGAATTCACTAGATCTTCCTCCTATTTGCTTTGTTAACTTGCTAGAAAACGGTTCATTTAATTAG 1194 0.428 MARKRKVASSAVEEGNLCDGSSMGWDEMMKQAAALGGVQRARKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSQSSTTPALSSKITNLLLQRLKERNNNNTCSSTSILVNNQHMQQQVDNAYYGEGEGSSTQFSIDQFTDFLNEPEDYSTSNNDFINNTAQIDYITSSFESCLTEKDVQYKSSDDVTPQTSSNDSNSGVEESEEESTDLGVQSSTNLDVHDFRFLDNIAPPSYYSPFEIAEEIKEEEEEPENENYGNEPSMLRDVMKRMTYERKFSASLYAFNGIPECLKLKLESGLADQLTSLQMACSKNNKHEKKNKEEQEEHHQQQTSPDMDSSSVDGELLLWNSLDLPPICFVNLLENGSFN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0921 397 Gene3D AP2/ERF domain 43 101 IPR036955 GO:0003700|GO:0006355
Aed3g0921 397 MobiDBLite consensus disorder prediction 214 228 - -
Aed3g0921 397 CDD AP2 43 100 IPR001471 GO:0003700|GO:0006355
Aed3g0921 397 MobiDBLite consensus disorder prediction 341 361 - -
Aed3g0921 397 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Aed3g0921 397 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 339 - -
Aed3g0921 397 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Aed3g0921 397 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Aed3g0921 397 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 3 339 - -
Aed3g0921 397 Pfam AP2 domain 44 93 IPR001471 GO:0003700|GO:0006355
Aed3g0921 397 SUPERFAMILY DNA-binding domain 44 101 IPR016177 GO:0003677
Aed3g0921 397 MobiDBLite consensus disorder prediction 211 244 - -
Aed3g0921 397 Coils Coil 335 362 - -
Aed3g0921 397 MobiDBLite consensus disorder prediction 341 370 - -
Aed3g0921 397 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0921 Aed-Chr3 6746763 6747956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0921 42 120 AP2-EREBP Transcription Factor Family AT5G19790 73.418 1.26e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed3g0921 AP2 7.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0921 K09286 - gmx:100786711 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0921 3 6746763 6747956 Aed3g0921 3 6746763 6747956 ECH