Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0916 ATGGCAACACCTTCTCTAATAATGACTGTGTCACAAGACGGAACCGGACAGTACCGGACGGTGCAGGAAGCCCTAGACGCCGTGCCGCTCGGCAACGCTCGCCGGACGGTGATTCGGGTGCTGCCGGGAACCTACCGGCAGCCCCTCTACGTGGCAAAGACTAAGAACTTCATCTCCATCATCGGCGTTCGCCCCGAGGACACCGTTCTCACTTGGAACAACACTGCCACCTCAATCCTCCACCACCACCAGGATGCTAGGACGATAGGGACTGGAACCTTTGGTTGTGGCACCATCATTGTGGAAGGAGGGGACTTTATTTCTGAAAATATTACCTTTGAGAATTCTTGCCCTCAGGGTGCAGGGCAGGCAGTGGCAGTTAGAGACACACTGTATTTGCATTATGGAAAACAATATTTGAAAGATTGTTATATTGAAGGAAGTGTGGACTTCATTTTTGGTAATAGCACTGCACTCTTGGAACATTGTCACATCCACTGCAAGACTGCAGGGTTCATAACTGCACAGAGCAGAAACTCTCCACAGGAAAAAACTGGTTTTGTATTCCTCAGATGTGTTGTGACAGGTAATGGGGGAACTTCATATACATATCTGGGACGACCATGGAGACCTTTTGCAAGAGTGGTCTTTGCATTCACTTACATGGATCAATGTATAAAGCCTGCTGGTTGGAATAATTGGGGCAAAACTGAGAATGAAAAAAGTGCTTGCTTCTATGAATACAGGTGTTTTGGACCAGGTTTCTGTCCATCCCAAAGAGTGAAATGGGCCAAAGAATTAAAAAAGGAAGGTGCTGAGCAGTTTCTGATGCATAGCTTTATTGACCCACTAGAATCAGAGAGACCTTGGCTTGCTCAAAGAATGGCCCTCAGGATTCCATATTCTGCTTAG 912 0.4715 MATPSLIMTVSQDGTGQYRTVQEALDAVPLGNARRTVIRVLPGTYRQPLYVAKTKNFISIIGVRPEDTVLTWNNTATSILHHHQDARTIGTGTFGCGTIIVEGGDFISENITFENSCPQGAGQAVAVRDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKTAGFITAQSRNSPQEKTGFVFLRCVVTGNGGTSYTYLGRPWRPFARVVFAFTYMDQCIKPAGWNNWGKTENEKSACFYEYRCFGPGFCPSQRVKWAKELKKEGAEQFLMHSFIDPLESERPWLAQRMALRIPYSA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0916 303 Pfam Pectinesterase 8 282 IPR000070 GO:0030599|GO:0042545
Aed3g0916 303 PANTHER PECTINESTERASE 5 302 - -
Aed3g0916 303 ProSitePatterns Pectinesterase signature 2. 145 154 IPR033131 -
Aed3g0916 303 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 302 - -
Aed3g0916 303 SUPERFAMILY Pectin lyase-like 3 282 IPR011050 -
Aed3g0916 303 Gene3D - 7 128 IPR012334 -
Aed3g0916 303 Gene3D - 129 297 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0916 Aed-Chr3 6716815 6721871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0916 7 296 Carbohydrate Esterase AT5G47500 36.076 2.12e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0916 K01051 - gmx:100810259 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0916 3 6716815 6721871 Aed3g0916 3 6716815 6721871 ECH