Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0901 ATGATGATCGTAAATATTCCAAACATGAAAGTTGTTTTTTTCTTAGTGTTTTGCCTTAGTATTGGGATAGTGTCAGGTCAGTTATCCTCAACCTTTTATGGAAAAACGTGCCCTAATGCTCTTTCAACCATTAAATCAGCAGTAGTGTCTGCTGTGAACAGCGAGCGTCGCATGGGAGCTTCCTTGCTCCGTCTTCATTTCCATGATTGTTTTGTTCAAGCAAGTCAACTTTCACTTCCTTCTTCTTCTTCTTCTTTTTCTGGATGTGATGCATCAGTATTATTAGATGATACATCGAGTTTCACAGGTGAGAAGACAGCGGGTCCCAACCGTAATTCCCTAAGAGGCTTTGATGTAATAGACAACATCAAGTCTAAAGTTGAGAGCTTATGCCCAGGTGTTGTCTCTTGTGCTGATATTCTCGCTGTAGCCGCAAGAGACTCAGTCGTTGCTGTAATCCTCTCACTGGCTCTAGTGGCCAGATTAGAACCAATTGCAGGAAGACCAACTAAGATCTTGGACCTTCTTGTACTAAGTACTATTTTTTTGGTATACAATGTTCGCACTGAGATTTGA 576 0.4115 MMIVNIPNMKVVFFLVFCLSIGIVSGQLSSTFYGKTCPNALSTIKSAVVSAVNSERRMGASLLRLHFHDCFVQASQLSLPSSSSSFSGCDASVLLDDTSSFTGEKTAGPNRNSLRGFDVIDNIKSKVESLCPGVVSCADILAVAARDSVVAVILSLALVARLEPIAGRPTKILDLLVLSTIFLVYNVRTEI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0901 191 SUPERFAMILY Heme-dependent peroxidases 27 151 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed3g0901 191 PANTHER PEROXIDASE 72-RELATED 20 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g0901 191 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g0901 191 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g0901 191 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g0901 191 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g0901 191 Gene3D - 28 172 - -
Aed3g0901 191 ProSiteProfiles Plant heme peroxidase family profile. 27 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g0901 191 Pfam Peroxidase 45 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g0901 191 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Aed3g0901 191 PANTHER PEROXIDASE 20 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0901 Aed-Chr3 6572220 6574368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0901 23 152 Peroxidase AT5G05340 66.154 2.76e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0901 K00430 - gmx:100815142 219.164