Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0900 ATGGCTACTGCTACTAATTCTTTCTCCATGACCATGATACCAATCTTCAAAATACGTTTCTTCTTATTCTTATGCTTTATTGGGATAGCTTCATCTCAATTGTCCTCTACTTTTTACTCCACAACGTGTCCCAATGCGCTTTCAACCATTAAGACTGCAGTGGATTCTGCTGTGAGCAACGAGGCTCGCATGGGAGCATCACTTCTACGTCTCCATTTCCACGATTGCTTTGTTCAAGCAAGTCTCAACTTACCCTTCATTAATCTTTGTGAACAAACGGCACATGGCAACGCTAATTCCATAAGAGGATTTGATCTTGGTGGACCTAGTTGGTCAGTGCAATTGGGCAGAAGAGATTCAATATATGCAAGTTTTGATTCTGCTAAGTCAGACTTGCTCTCTTTTACTCTCAGTCTACAAGGACTCATCGATAATTTCGGTAAAAAAAGGTTTCACCCCCCAAGAAATGGTTGCTCTCTCAGGTAA 486 0.4136 MATATNSFSMTMIPIFKIRFFLFLCFIGIASSQLSSTFYSTTCPNALSTIKTAVDSAVSNEARMGASLLRLHFHDCFVQASLNLPFINLCEQTAHGNANSIRGFDLGGPSWSVQLGRRDSIYASFDSAKSDLLSFTLSLQGLIDNFGKKRFHPPRNGCSLR 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0900 161 SUPERFAMILY Heme-dependent peroxidases 33 152 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed3g0900 161 Gene3D - 106 132 - -
Aed3g0900 161 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g0900 161 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g0900 161 ProSiteProfiles Plant heme peroxidase family profile. 33 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g0900 161 Gene3D Peroxidase, domain 2 133 151 - -
Aed3g0900 161 PANTHER PEROXIDASE 19 105 - -
Aed3g0900 161 PANTHER PEROXIDASE 105 152 - -
Aed3g0900 161 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Aed3g0900 161 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g0900 161 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g0900 161 PANTHER PEROXIDASE 72-RELATED 19 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g0900 161 PANTHER PEROXIDASE 72-RELATED 105 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g0900 161 Gene3D - 33 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0900 Aed-Chr3 6565040 6568327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0900 29 146 Peroxidase AT5G05340 40.385 8.60e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0900 K00430 - gmx:100800219 186.808