Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0893 ATGTGGTTGAAAGTGAAGAGTTCCCTCTCTCAAGTTAATGAGGTTGTTGCTCCATCTGAGCTAGCCTTAGTAATCCTTGATGAGATTGGATGTTTAGACCACTGCCAACATCTATTATATGCTCATGTGCCTGAGGTGACTGGAAATCTAAGCAACCACGTGATGTCAAAACGTGATGTTTGCCAAGGAACATTTGCTAAGGTCTACCATGCTAGGAACCTTATAACTGGCATGAGTGTGGCCATTAAGGTAGTTGATAAAGAAAAGATTTTGAAAGTTGGAATGATTGATCAGATTAAGCGTGAAATTTCAGTGATGAGATTAATCAGACATCCACATGTGGTTGAGCTTTACGAGGTAATGGCCAGTAAAACCAAAATTTACTTTGTCATGGAGCATGCAAAAGGTGGTGAGCTCTTCAACAAGATAGTCAAAGGACGGCTCACGGTGGATGTTGCTAGGAAATATTTTCAGCAACTGATTAGTGCAGTTGACTACTGCCATAGCAGGGGTGTGTGTCATCGAGATTTAAAACCTGAAAATCTGCTATTGGATGAAAATGAGAATTTGAAGGTTTCAGACTTTGGTTTGAGTGCCCTTGCTGAAACTAAGTGCCAAGATGGATTGCTCCATACTACATGTGGCACCCCTGCCTATGTTGCTCCGGAAGTGATAAACAGAAAGGGCTATGATGGGATGAAAGCCGATATATGGTCATGTGGGGTAATCTTGTATGTTCTATTGGCCGGTCATCTTCCATTCCATGATTCAAATCTGATGGAGATGTACAGGAAAATTGGTAGAGGGGAATTCAAATTTCCTAAATGGTTTGCACCGGATGTTCGCCGGTTATTGTCCAGAATATTGGATCCAAACCCAAAGACCAGGATATCGATGGCAAAGATTATGCAAAGTTCTTGGTTTACAAAGGGGTTGGTGAAGCCTGCTACTATTGCAACTGAAATTGAAAAACTGGCTTGCCTGGATGCTGATGGAATATTTGAAGCGTGCGAGAATGGTGATCCTATTGCTGAGTCAAAGCAAGAACAGACTAAGCCTTATAATTTAAATGCTTTTGATATTATCTCCTTCTCAACTGGTTTTGATTTATCTGGTTTGTTCGAGGACACTGTTCTCAAGAAAGAGACGCGGTTCATGTCAGAGAAGCCTGCCTCAATCATAATCTCGAAGTTGGAAGAAATTTGTAAGCGGCTTCGCATGAAAGTAAGTAAGAAAGATGGAGGCTTGCTCAAGTTGGAAGGTTCCAAGGAAGGCAGGAAAGGGACTTTGGGTGTTGATGCTGAGATTTTTGAGATTACCCCACACTTCCATATGGTGGAACTTAGAAAGTCCAATGGGGACACCATGGAGTATCAGAAGCTTTTTAAACAGGATATAAGACCAGCACTTAAGGACATTGTTTGGACCTGGCAAGGAGAACAACCACAGCAAGAGCAACAGCAACATGAAGTAGTCCAGGAAGAGCACCAACCTTCTCATACTGCTTAG 1509 0.4208 MWLKVKSSLSQVNEVVAPSELALVILDEIGCLDHCQHLLYAHVPEVTGNLSNHVMSKRDVCQGTFAKVYHARNLITGMSVAIKVVDKEKILKVGMIDQIKREISVMRLIRHPHVVELYEVMASKTKIYFVMEHAKGGELFNKIVKGRLTVDVARKYFQQLISAVDYCHSRGVCHRDLKPENLLLDENENLKVSDFGLSALAETKCQDGLLHTTCGTPAYVAPEVINRKGYDGMKADIWSCGVILYVLLAGHLPFHDSNLMEMYRKIGRGEFKFPKWFAPDVRRLLSRILDPNPKTRISMAKIMQSSWFTKGLVKPATIATEIEKLACLDADGIFEACENGDPIAESKQEQTKPYNLNAFDIISFSTGFDLSGLFEDTVLKKETRFMSEKPASIIISKLEEICKRLRMKVSKKDGGLLKLEGSKEGRKGTLGVDAEIFEITPHFHMVELRKSNGDTMEYQKLFKQDIRPALKDIVWTWQGEQPQQEQQQHEVVQEEHQPSHTA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0893 502 MobiDBLite consensus disorder prediction 480 502 - -
Aed3g0893 502 Gene3D Kinase associated domain 1, KA1 358 476 - -
Aed3g0893 502 Pfam NAF domain 353 411 IPR004041 GO:0007165
Aed3g0893 502 ProSiteProfiles Protein kinase domain profile. 54 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0893 502 PANTHER - 58 487 - -
Aed3g0893 502 ProSiteProfiles NAF domain profile. 351 375 IPR018451 GO:0007165
Aed3g0893 502 SMART serkin_6 54 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0893 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Aed3g0893 502 SUPERFAMILY Protein kinase-like (PK-like) 62 309 IPR011009 -
Aed3g0893 502 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 58 487 - -
Aed3g0893 502 Gene3D Transferase(Phosphotransferase) domain 1 48 357 - -
Aed3g0893 502 CDD CIPK_C 357 471 - -
Aed3g0893 502 Pfam Protein kinase domain 57 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0893 Aed-Chr3 6512269 6513976 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0893 58 483 CBL-interacting serine-threonine protein kinases AT5G58380 65.455 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed3g0893 Pkinase 2.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0893 K07198 - gmx:100811923 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0893 3 6512269 6513976 Aed3g0893 3 6512269 6513976 ECH
Aed3g0893 3 6512269 6513976 Aed4g2182 4 24616121 24618472 ECH