Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0886 ATGGGTAACTATAGGTTCAAATTATCAGATATGATTCCCAATGCCTGGTTTTACAAACTCAAGGACATGGGAAAAACAAGAAAACAAACCCCAACTCATTCCAGGAAGAAAAAGCAACAACGTTCACCAGCCTCAACCACACAACCATCAAAACCAAAGCAACCCCACCAGCACAATCTCAGAAAGTCTTACTATTTCACAAGAGAGCTTACCCCAAATGATAGAATCTACTCCTCAGTCTCACCAACAAATTTCCTTGAACCCCCTAGAAAATCATCCAAAGAAAGACTCATGAGAAGAACTTTAAGTACTTCTTCTCCTAAGCTTGTTGGTGTCTCTAACAATAATAACCTCTCATCACCACATGGTAGCTCTGCTGAAACAGAGTACCCTGAACCAGAATTCAGAACAGACCGTGTTCTTCCCACTGATTCATCATTCGATGAAACGGTTCCTTGGGCCAACAACTCTTGCGTCTGCAGGGTACACTCCAACACCAAGGATATCATCATCGATGTAGACAACAATTCCATAGCCAGAAAAGATGACAAGTTAGAAGAAGGGTATGAATATGAATGTGATTCCTTCTCAGACCTTGTTCTTCCACCAATTGTGACCAAGCCTGCGAAATTCAACGACTTGCTCAGTGATGCCAAGAAGAAAGAAACCAAACCAAGAAGTAAAATGGTTGCTGCACATGAAGAAGAAGAACCAAACCTCAAGAAGGCACCTCCGAGAGTTAAAATTATGAAGGAAGACACTGCATCAATGAAGGAACACAAGAACACTACCTATGGAAGGAGATTCTTCTCTGTGAGCTCTCCGGGAGTGAGGCTTCGGCTGAACTCTCCACGCATTGCGAGCCGGAGAATTCAGTCACACGGCCGGAGGAGCACGTCCGGCTCCTCCGGCCCGCGGAGAAGCCTCTCAGATAGCTTTGCGGTTGTGAAGTCATCACTGAATCCACAGAGGGACTTCAGAGAATCAATGGTGGAAATGATTGTGCAGAACAACATTAGGACTTCCAAGGATTTGGAGGATCTTCTTGCTTGCTACCTTTCTCTCAATTCAGATGAGTATCATGATCTCATTATCAACGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATAATAACTAG 1143 0.4339 MGNYRFKLSDMIPNAWFYKLKDMGKTRKQTPTHSRKKKQQRSPASTTQPSKPKQPHQHNLRKSYYFTRELTPNDRIYSSVSPTNFLEPPRKSSKERLMRRTLSTSSPKLVGVSNNNNLSSPHGSSAETEYPEPEFRTDRVLPTDSSFDETVPWANNSCVCRVHSNTKDIIIDVDNNSIARKDDKLEEGYEYECDSFSDLVLPPIVTKPAKFNDLLSDAKKKETKPRSKMVAAHEEEEPNLKKAPPRVKIMKEDTASMKEHKNTTYGRRFFSVSSPGVRLRLNSPRIASRRIQSHGRRSTSGSSGPRRSLSDSFAVVKSSLNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIINVFKQIWFDLTDNNN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0886 380 MobiDBLite consensus disorder prediction 283 310 - -
Aed3g0886 380 ProSiteProfiles OVATE domain profile. 315 374 IPR006458 -
Aed3g0886 380 MobiDBLite consensus disorder prediction 286 310 - -
Aed3g0886 380 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 379 - -
Aed3g0886 380 MobiDBLite consensus disorder prediction 75 135 - -
Aed3g0886 380 MobiDBLite consensus disorder prediction 23 62 - -
Aed3g0886 380 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 313 376 IPR006458 -
Aed3g0886 380 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Aed3g0886 380 MobiDBLite consensus disorder prediction 99 126 - -
Aed3g0886 380 Pfam Transcriptional repressor, ovate 319 375 IPR006458 -
Aed3g0886 380 MobiDBLite consensus disorder prediction 41 62 - -
Aed3g0886 380 MobiDBLite consensus disorder prediction 218 240 - -
Aed3g0886 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 379 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0886 Aed-Chr3 6455138 6456280 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed3g0886 Ovate 4.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0886 - - gmx:100794572 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0886 3 6455138 6456280 Aed3g0886 3 6455138 6456280 ECH