Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0884 ATGGAATTGCCTGATACAACAACAATCAATACGTACAAGGGGAGATTCTGCACCAGTGGTGGAGTTAAGTCTCAGCTTGGTTATGTTGAAACTGATCCATCTGGTCGATATGGCCGTTTCAGGGATGTTCTGGGGAAAGGAGCAATGAAAACTGTGTATAGGGCATTTGATGAGTTACTAGGAATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCACTCACCAGAGCAACTTCAGCGCCTTTATTCAGAAGTTCATCTCCTTAAGCACCTTGACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAACAACAGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACACTTAGAGAGTATAGGCAGAAGTACAAGAGAGTTGATATCAGAGCAGTTAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTACTTACACAGCCATAATCCTCCTGTGATACATAGAGATCTGAAGTGTGACAATATCTTTGTCAATGGCCATCAAGGGAGGGTCAAGATTGGTGACTTAGGCCTGGCAGCTATACTTAAAAGCTCCCAACATGCCCACAGTGTCATAGGCACACCAGAATTCATGGCACCAGAGCTGTATGAAGAGAAATACAACGAGCTTATAGATATATACTCCTTCGGTATGTGCATGATAGAATTGCTTACTTTTGAGTTCCCATACAATGAGTGCGCCAACGCAGCTCAAATATACAAGAAAGTTACTTCAGGTAAGCTGCCTGAAGTGTTTTACAGAATCGAAAATTTGGAAGCCCGAAAGTTTGTGGGAAAATGTTTGGCAAATGTCTCAGAGAGACCATCAGCGAAGGAGCTCTTGTTGGACCCTTTTTTAGCCATGGAGAAACTTGATCAAATAGCAACATGTCCACCAAGCATACCATCATTATGTGCAAGTAAATCTTTCAAGCTTAATGCCCCTGCACCAATTCCCAACGAGCATCATCGTGATCAAACAAAGAGCGCGGAGATGACAATTACTGGACATGTGTTCTTTCCATTTGACACATTAAAGGACACGGCTATTCAGGTGGCGATGGAGATGGTGCAAGAACTTGAGATTAGCCACTTGGAGCCATTGGAGATTGCTGCAATGATAGATCATGAGGTGTCAGCTCTGGTTCCAACTTGGAGGGACAGGGTTAAGTGTCACCACCAGCGACAACACAGCTTTAACTACGAAGAAGATGAAGATGTCAATAACCACCACCCTTTCTTCTTATCATCTTCTCCATCATCCCCTCGCGGCTCTGGCCACAATATTTCTGCTTCCAACTCCTTCAAGACCCGTGTTCGTGGTGGAAACCATTACCCGTTTACTCAAGAATGGCCTCAAGATGATCCATTTTTGAACGAGGAGACAAGCTCTCAAGCCTCAATGAACTCATTCAAGTGTTCGAGTTTTCAGTTCTGCGACCCGAGCCACGAAGTAGACGAGCATGCCCCAACTGCAGAAGGACCCGAACGCAACAACAGCAATACCAAGTGCGCAACATTATCATACCGGATCGAAGAACCAGAACCCAATTTGACGAAACCGTTTAACTACTGCCCGCCCCCGCCGCCGCGAATGGATCATTCTTTGTGCGGTTGCAGCAGGTTCGGGACGACGAGCCACGCGTGCCCGAGGCTAACGAGGATCCGGTCGTGCCCGCACGAGCGGAGGAGCCAGCAGCTCCAGCGCTCGTTGATGTTGGAGGAGATGTACAAGTACAAGAGACGCTTGTTCAACACCGTTGCCGCCGTCGAAAACATCGGGTTTCGCCATCCAGACAGACCCGGAATATGCTTTCCTCGTGTCTAG 1857 0.4669 MELPDTTTINTYKGRFCTSGGVKSQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLDHDSMMIFYGSWIDVNNRTFNFITELFTSGTLREYRQKYKRVDIRAVKNWARQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILKSSQHAHSVIGTPEFMAPELYEEKYNELIDIYSFGMCMIELLTFEFPYNECANAAQIYKKVTSGKLPEVFYRIENLEARKFVGKCLANVSERPSAKELLLDPFLAMEKLDQIATCPPSIPSLCASKSFKLNAPAPIPNEHHRDQTKSAEMTITGHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAAMIDHEVSALVPTWRDRVKCHHQRQHSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHNISASNSFKTRVRGGNHYPFTQEWPQDDPFLNEETSSQASMNSFKCSSFQFCDPSHEVDEHAPTAEGPERNNSNTKCATLSYRIEEPEPNLTKPFNYCPPPPPRMDHSLCGCSRFGTTSHACPRLTRIRSCPHERRSQQLQRSLMLEEMYKYKRRLFNTVAAVENIGFRHPDRPGICFPRV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0884 618 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0884 618 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Aed3g0884 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Aed3g0884 618 SUPERFAMILY Protein kinase-like (PK-like) 40 297 IPR011009 -
Aed3g0884 618 Gene3D Transferase(Phosphotransferase) domain 1 121 303 - -
Aed3g0884 618 PANTHER WNK KINASE 4 347 - -
Aed3g0884 618 PANTHER WNK KINASE 345 610 - -
Aed3g0884 618 MobiDBLite consensus disorder prediction 424 443 - -
Aed3g0884 618 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0884 618 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0884 618 MobiDBLite consensus disorder prediction 453 473 - -
Aed3g0884 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 347 - -
Aed3g0884 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 345 610 - -
Aed3g0884 618 CDD STKc_WNK 36 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0884 Aed-Chr3 6438376 6441486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0884 19 416 MAP Kinase Kinase Kinase AT3G51630 61.758 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed3g0884 Pkinase 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0884 K08867 - gmx:100272206 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0884 3 6438376 6441486 Aed3g0884 3 6438376 6441486 ECH
Aed3g0884 3 6438376 6441486 Aed2g0984 2 7748536 7754896 PCT