Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0882 ATGAGTTTCAGAGAGGGGAAGATAGAAGGAGAAGAAGAAAGGGAGTGTGAAGAATCATCGGTGTATGAAAATCAAATTGTTGCAATCAAAGTTCTGCATCGAGGGAGCACTTCTGATGAAAGAGCTTCCCTTGAAGATCGTTTTGCTAGAGAAGTTATTATGATGTCTCGCGTCCACCATGACAATCTTGTTAAGTTTATTGGAGCGTGTAAGGATCCTCTTATGGTAATAGTTACTGAGCTATTACCAGGGATGTCATTGCGTAAATATTTAACGAGTATCCGTCCTAAACTATTAGACCTTGATGTGGCTATAAACTTTGCCCTTGATATTGCTCGAGCCATGGACTGGCTACATGCCAATGGGATCATACACAGAGATCTGAAACCTGACAATCTGTTGCTTACGGCAAACCAGAAGTCTGTTAAACTTGCAGATTTTGGTCTTGCAAGAGAGGAAACTGTGACTGAAATGATGACCGCAGAAACAGGAACTTACCGTTGGATGGCACCAGAGCAAGAGAGGCCAACCATTCCAGATGATATATCCCCTGAACTTGCTTTTGTCATACAATCATGCTGGGTTGAAGATCCTAACTTGAGACCAAGCTTTAGTCAGATAATCCGTATGCTCAACGCGTTTCTCTTCACACTCTCTCCACCCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTGCCAGTAGTACCTGACAATGAACCTGAGGTGGCTACAACAAGTAATGGCACCATTACTGAGTTTTCTGCCCGGAACAGAGGAAAGTTTGGCTTTCTTCGCCAGTTGTTTTCTTCAAAGAGGACCAAAAACTAA 831 0.4368 MSFREGKIEGEEERECEESSVYENQIVAIKVLHRGSTSDERASLEDRFAREVIMMSRVHHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKLLDLDVAINFALDIARAMDWLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREETVTEMMTAETGTYRWMAPEQERPTIPDDISPELAFVIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPPSPPPPPPPPPPLPVVPDNEPEVATTSNGTITEFSARNRGKFGFLRQLFSSKRTKN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0882 276 MobiDBLite consensus disorder prediction 220 238 - -
Aed3g0882 276 Pfam Protein kinase domain 23 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0882 276 PANTHER SERINE-THREONINE PROTEIN KINASE 173 225 - -
Aed3g0882 276 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 173 225 - -
Aed3g0882 276 MobiDBLite consensus disorder prediction 220 248 - -
Aed3g0882 276 SUPERFAMILY Protein kinase-like (PK-like) 23 248 IPR011009 -
Aed3g0882 276 ProSiteProfiles Protein kinase domain profile. 1 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0882 276 Gene3D Transferase(Phosphotransferase) domain 1 16 176 - -
Aed3g0882 276 SMART serkin_6 3 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0882 276 Gene3D Transferase(Phosphotransferase) domain 1 177 218 - -
Aed3g0882 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Aed3g0882 276 PANTHER SERINE-THREONINE PROTEIN KINASE 21 172 - -
Aed3g0882 276 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 21 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0882 Aed-Chr3 6425226 6429128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0882 22 276 MAP Kinase Kinase Kinase AT5G01850 54.819 2.45e-108 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Aed3g0882 Pkinase 1.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0882 - - gmx:100809251 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0882 3 6425226 6429128 Aed3g0882 3 6425226 6429128 ECH
Aed3g0882 3 6425226 6429128 Aed2g0981 2 7718323 7724466 PCT