Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed3g0875 | ATGCAACGGCGTTTTCTGGGGACGGAGCTGAGCATGCCACCCTCGTACGGAGGCGGCGGCGGAAACAGCACGCGCGACACGTTCATCAGCGACGCCAACTTCGACACCAACATGGTCATCATTCTGGCGGCGCTGCTGTGCGCGCTCATATGCGCGCTGGGCCTCAACTCCATCGCGCGGTGCGCGCTGCGGTGCGGGCGGCGCTTCGGCGACGAGACGCCGGAGCAGGCGGCGGCGCGTCTCGCGGGGACTGGGCTGAAGCGCCGCGAGCTCAGCCGCATCCCGGTGGCGGTGTACGGTGCCGGAGGAGAAAACACCATTCCGGCGACGGAGTGCCCCATCTGCCTCGGCGAGTTCGAGAAAGGCGACAGGGTCCGAATGCTGCCCGAGTGCAACCACGGGTTCCACGTGAGCTGCATTGACACGTGGCTCGTGTCGCATTCCTCGTGCCCCAACTGCCGCCACTCGCTCCTCGAGAAACCCGCCCCCGCCGTGCCGGAGAATGGGTCCCTGCGGCGGAGCGACGTCGTGGTGGTGGTGGTGGAGCAGACAAGTTGA | 558 | 0.6738 | MQRRFLGTELSMPPSYGGGGGNSTRDTFISDANFDTNMVIILAALLCALICALGLNSIARCALRCGRRFGDETPEQAAARLAGTGLKRRELSRIPVAVYGAGGENTIPATECPICLGEFEKGDRVRMLPECNHGFHVSCIDTWLVSHSSCPNCRHSLLEKPAPAVPENGSLRRSDVVVVVVEQTS | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed3g0875 | 185 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 71 | 159 | IPR013083 | - | |
Aed3g0875 | 185 | CDD | RING-H2_EL5_like | 111 | 154 | - | - | |
Aed3g0875 | 185 | PANTHER | RING-H2 FINGER PROTEIN ATL74 | 1 | 164 | - | - | |
Aed3g0875 | 185 | Pfam | Ring finger domain | 111 | 154 | IPR001841 | - | |
Aed3g0875 | 185 | SMART | ring_2 | 112 | 153 | IPR001841 | - | |
Aed3g0875 | 185 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Aed3g0875 | 185 | ProSiteProfiles | Zinc finger RING-type profile. | 112 | 154 | IPR001841 | - | |
Aed3g0875 | 185 | SUPERFAMILY | RING/U-box | 105 | 160 | - | - | |
Aed3g0875 | 185 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 164 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed3g0875 | Aed-Chr3 | 6397389 | 6397946 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed3g0875 | 6 | 181 | C3H Transcription Factor Family | AT3G10910 | 52.973 | 7.08e-56 | 172 |