Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0873 ATGGAACAAAAACAAAAGAGGGGCAAACTTTTCCAATCTGCTTTCTTTGACTGGACAAGAGGGTTTTCGTCGACGAATCAAAACCACAAAAAAGTTCCGATTTTTACCCATTTCGCTGCCCCTGGATCGCTTCACTTCGAGTTGCATGAGCTCCCATTTCTCCCAAAGAGTTCTCTACAACAACCAAGTTCTGTGCAAAGGATGGGGTGCTTCACTGTATTGAAGAGCAAAAAGAAAAAGTCTGATCCAATTACATATGTAAAACGTGTAAGCCATAATGAGAACATACCAACAGTACTGCCTGAACCTCAAACTCGTACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAGGACCAGAGTGAAACCAATTCAACCTGTTCATAAAGTCAGTAGCAATAGAACGCGAACATTATCTGCTCCATCAACTCTTGATGCAGCAGAACAAGATGCTTTGGTTTCAATTGAGTATGAGGAACAAGAAGAGTCCAGACACCGAGCTGGATCAATGAAGGAGCAGCGTTCATCTAGTCCACAACCTTTACCACTTCCATCCCCTCAGGGAGGTAGTTCATTGAAGTCTATTGGCAGCTTTAAGTCAGTGACAGCTAGTGGTCCTCTCAATGCTTCTGGACCTTTGCCACTTCCACCTACTGGGTCACTTCGGAATTTTCTGTATGATGAAATTGCTGCTGCTTGCCACAATTTCTCTTCTGATAGATGCATGTCAGAGTGTCTTTCGTCCACCATATATAAGGCTTCCTTTGGTGATGATGTTTCAAGTTCGAAGAAGTTTGAAGCTACTGTCACACGGCTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAGTATTCTTGCATCTTTGCAACATCCAAATCTCTGTAAATTGCTAGGATTTCATGCACGAGAGGGTTCAGAAAATAGATTGTTGGCAATGTATAATGAATTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAAACACTGGAGAAAGGAATGCTCACTCCAAAGAGCAATGTATGGAGTTTTGGCATTTTCCTTCTGGAGCTACTTACAGGAAGAAAGAATCTTGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGCCGGCCTTTCCTAGCCGACAACTACCGTCTGTCGTTGATCATGGATCCTCAACTCAAAGGCCGCTTTCCTTCTAAAGCAGCGAGAACAATAGCTGACACAGCACAAAGATGCCTTCAAAAGGAGCCATCAGACAGACCTACCATGAGAACTGTTGTCGAGCATTTGAAGATGATACAGGATTTGAAATACTCAAGCCGGTTCCCGCTGCAGGAGCCATCGTCAAACTCTGGAAAACATATGTCAAGATCACCAAGTCTCAATGGCATCATATGCCCTGCACCAAGGTTGAGTTTCTCGCCATCACCGCCATCTGGAGTAGTCCCAGTATCCGTTTCACCTCCAAGATGGTCTAGTGGAGTGCTGATTCTCCCGCCGCGTGCTTGTTCTTCCAGTCTCTCGTTGGAGGAGCTTGATCGGCAGGAGAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA 1698 0.447 MEQKQKRGKLFQSAFFDWTRGFSSTNQNHKKVPIFTHFAAPGSLHFELHELPFLPKSSLQQPSSVQRMGCFTVLKSKKKKSDPITYVKRVSHNENIPTVLPEPQTRTRSLQSAPPSFRTRVKPIQPVHKVSSNRTRTLSAPSTLDAAEQDALVSIEYEEQEESRHRAGSMKEQRSSSPQPLPLPSPQGGSSLKSIGSFKSVTASGPLNASGPLPLPPTGSLRNFLYDEIAAACHNFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVSILASLQHPNLCKLLGFHAREGSENRLLAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAARTIADTAQRCLQKEPSDRPTMRTVVEHLKMIQDLKYSSRFPLQEPSSNSGKHMSRSPSLNGIICPAPRLSFSPSPPSGVVPVSVSPPRWSSGVLILPPRACSSSLSLEELDRQESRKSSSSASRRASVEGF 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0873 565 MobiDBLite consensus disorder prediction 157 171 - -
Aed3g0873 565 ProSiteProfiles Protein kinase domain profile. 124 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0873 565 MobiDBLite consensus disorder prediction 157 196 - -
Aed3g0873 565 MobiDBLite consensus disorder prediction 474 490 - -
Aed3g0873 565 Gene3D Transferase(Phosphotransferase) domain 1 315 478 - -
Aed3g0873 565 MobiDBLite consensus disorder prediction 474 493 - -
Aed3g0873 565 PANTHER OS01G0822200 PROTEIN 314 564 - -
Aed3g0873 565 PANTHER OS01G0588500 PROTEIN-RELATED 112 314 - -
Aed3g0873 565 MobiDBLite consensus disorder prediction 126 144 - -
Aed3g0873 565 PANTHER OS01G0588500 PROTEIN-RELATED 314 564 - -
Aed3g0873 565 PANTHER OS01G0822200 PROTEIN 112 314 - -
Aed3g0873 565 Pfam Protein kinase domain 322 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0873 565 Gene3D Phosphorylase Kinase; domain 1 217 314 - -
Aed3g0873 565 MobiDBLite consensus disorder prediction 97 118 - -
Aed3g0873 565 MobiDBLite consensus disorder prediction 539 565 - -
Aed3g0873 565 MobiDBLite consensus disorder prediction 97 145 - -
Aed3g0873 565 SUPERFAMILY Protein kinase-like (PK-like) 213 472 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0873 Aed-Chr3 6382560 6388481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0873 215 466 Receptor kinase-like Gene Family AT4G02010 30.065 9.40e-35 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Aed3g0873 Pkinase 4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0873 - - gmx:100809117 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0873 3 6382560 6388481 Aed3g0873 3 6382560 6388481 ECH
Aed3g0873 3 6382560 6388481 Aed2g0971 2 7653916 7657624 PCT