Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0868 ATGAAGCAATTCAGCGTGTGTGTGTTGTTTCTGATTCTCCTTGCACCGGTTATGTTGGTGTTTTCACTGGACCCTGGTTTCAATGATGATGTGTTGGGGTTGATTGTGTTCAAGGCTGGTTTGGATGATCCTAAAAGGAAACTCTCTTCTTGGAATGAGGATGATAACAGTCCTTGCAGCAACTGGGAAGGTGTGAAGTGTGATCCTTCATCAAATAGGGTCACTGCTCTTGTCCTTGATGGGTTCTCTCTTTCTGGGCATGTTGATAGGGGCTTATTGAGGTTGCAGTCTCTTGAAATTCTCTCACTTTCAAGAAACAACTTCACGGGGTCCATAAACCCTGATCTTTCTCGCCTTGGGAGTTTGCAAGCTGTGGACTTGAGTGACAACAACCTCTCTGGGGAGATCCCAGAAGGGTTTTTCCAACAATGTGGCTCTCTAAGGACAGTTTCATTTGCCAAGAACAACCTCACAGGTAAGATTCCTGAGTCCTTGAGTTCATGCTCCAATTTGGCAAGAGTTAACTTCTCATCTAATCAGCTCCATGGGGAATTGCCTAATGGGGTGTGGTTCTTGAGGGGGCTGCAGTCACTTGATCTGTCAGATAACTTGCTTGAGGGAGAGATTCCTGAAGGGATTCAGAATCTTTATGGTATGAGTGAGTTGAGTCTTCAGAGGAACAGGTTCAGTGGAAGGCTTCCTGGGGACATTGGAGGGTGCATACTTCTGAAATCACTTGACCTGAGTGGTAATTTTCTCTCTGGGGAGCTGCCTCAGTCAATGCAAAGACTCACTTCATGCACATCACTTAGTTTGCAGGGAAATTCAATCACAGGAGGCATTCCTGAATGGATTGGAGAATTGAAGAATCTAGAGGTGTTGGATCTTTCTGCCAATGGATTCTCTGGTTGGATTCCAAAGTCATTAGGGAATCTTGACTCTCTGCAGGGATTGAATTTGTCAAAGAATCAGTTGACAGGAAACTTGCCTGATTCAATGGTGAACTGTACCAAGCTTTTGGCTCTTGACATCAGCCACAATCACTTGGAAGGTCATGTTCCTTCATGGATTTTTAGGATGGGTGTGCAAAGTGTCTCTCTTTATGGGAATGGCTTTAGCAAGGGCAATTATCCTTCACTTAAGCCCACACCGGCATCTTACCATGGTCTTGAGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGTGCTTCCATCTGGCATTGGGGGACTTAGTAGCCTGCAAGTTTTTAATATTTCCACCAACAATATCTCTGGCTCTATTCCTGTGGGAATGGGAGAGCTTAAGTCTTTGTACATTGTTGACCTGAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGAAGGGGCAACTTCACTCAGTGAGCTAAGGCTGCAAAAGAACTTCCTAGGTGGGAGAATTCCAGCCCAAATTGACAAGTGTTCATCTCTAACATTTTTGATTCTTTCTCACAACAAGCTTACTGGTTCAATCCCTGCAGCCATTGCAAACCTCACCAATCTTCAGTATGTAGATTTGTCATGGAATGGACTCTCTGGAGGTTTACCCAAGGAGTTAACAAATCTTTCCCATCTTTTCTCATTTAATGTATCCTACAACCACCTTGAAGGTGAACTCCCTGTGGGGGGCTTCTTCAACACCATCTCCTCCTCATCCGTCTACGGTAACCCCCTGTTGTGTGGTTCCGTTGTCAACCACTCCTGCCCATCTGTTCATCCAAAACCTATTGTCCTAAACCCCAATTCTTCCGGTTCCAACTCCAGCCTTTCCTCGCAGAACCACCGGCATAAGATCATACTAAGTATCTCGGCTCTTATTGCTATTGGAGCAGCTGCTTTTATTGCCATTGGTGTTGTGGCTGTCACTGTCCTAAATATCCGAGTGCGTTCCTCAATGGAATGCACAGCTGCTCCATTTGCATTTTCTGGCGGTGAGGACTATAGCGGTTCACCAGAAGCAAATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCTGATGGAGCTCATAATCTTCTCAACAAAGAAAGTGAAATAGGCCGAGGTGGATTTGGAGTTGTTTATCGTACTTTCCTTCGCGACGGGCATGCTGTTGCAATCAAGAAACTTACAGTCTCCAGTTTGATCAAGTCCCAGGAAGAATTCGAGAGAGAAGTTAAAAAGCTTGGGAAAGTCAGGCACACAAATCTCGTGGCACTCGAAGGCTATTATTGGACTTCATCCTTGCAGCTCCTTATTTACGAATACCTATCAAGTGGGAGTTTGCATAAACTTCTACATGATGATAACAGCAAAAATGTCTTCTCATGGCCACAAAGGTTCAAGATTATTCATGGCATGGCAAAAGGGTTGGCCCATTTGCACCAAATGAACATAATCCACTACAACCTCAAATCAACAAACGTTCTAATTGATTGTTCTGGTGAGCCAAAGGTAGGAGACTTCGGCTTGGTGAAACTCTTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAGGTCCAAAGCGCGCTAGGATACATGGCGCCCGAGTTTGCTTGCCGCACGGTCAAGATAACTGAGAAATGCGATGTGTATGGTTTTGGGATCCTGGTGCTGGAGGTGGTGACAGGAAAAAGGCCTGTGGAATACATGGAGGATGATGTGGTGGTTCTTTGTGACATGGTGAGGAGTGCATTGGAAGAAGGCAAGGTGGAGCAATGTGTTGATAGGAGGCTTCTTGGTAACTTTGCTGCAGAGGAAGCAATTCCTGTGATGAAATTGGGGTTGATTTGTGCATCACAAGTGCCATCAAACCGTCCAGATATGGCTGAGGTAGTCAACATATTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAATTAGAATGA 2913 0.4483 MKQFSVCVLFLILLAPVMLVFSLDPGFNDDVLGLIVFKAGLDDPKRKLSSWNEDDNSPCSNWEGVKCDPSSNRVTALVLDGFSLSGHVDRGLLRLQSLEILSLSRNNFTGSINPDLSRLGSLQAVDLSDNNLSGEIPEGFFQQCGSLRTVSFAKNNLTGKIPESLSSCSNLARVNFSSNQLHGELPNGVWFLRGLQSLDLSDNLLEGEIPEGIQNLYGMSELSLQRNRFSGRLPGDIGGCILLKSLDLSGNFLSGELPQSMQRLTSCTSLSLQGNSITGGIPEWIGELKNLEVLDLSANGFSGWIPKSLGNLDSLQGLNLSKNQLTGNLPDSMVNCTKLLALDISHNHLEGHVPSWIFRMGVQSVSLYGNGFSKGNYPSLKPTPASYHGLEVLDLSSNAFSGVLPSGIGGLSSLQVFNISTNNISGSIPVGMGELKSLYIVDLSDNKLNGSIPSEIEGATSLSELRLQKNFLGGRIPAQIDKCSSLTFLILSHNKLTGSIPAAIANLTNLQYVDLSWNGLSGGLPKELTNLSHLFSFNVSYNHLEGELPVGGFFNTISSSSVYGNPLLCGSVVNHSCPSVHPKPIVLNPNSSGSNSSLSSQNHRHKIILSISALIAIGAAAFIAIGVVAVTVLNIRVRSSMECTAAPFAFSGGEDYSGSPEANDPNYGKLVMFSGDADFADGAHNLLNKESEIGRGGFGVVYRTFLRDGHAVAIKKLTVSSLIKSQEEFEREVKKLGKVRHTNLVALEGYYWTSSLQLLIYEYLSSGSLHKLLHDDNSKNVFSWPQRFKIIHGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKVGDFGLVKLLPMLDHCVLSSKVQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRSALEEGKVEQCVDRRLLGNFAAEEAIPVMKLGLICASQVPSNRPDMAEVVNILELIQCPSEGQEELE 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0868 970 Gene3D Transferase(Phosphotransferase) domain 1 764 968 - -
Aed3g0868 970 Gene3D Ribonuclease Inhibitor 291 580 IPR032675 -
Aed3g0868 970 SMART LRR_typ_2 192 215 IPR003591 -
Aed3g0868 970 SMART LRR_typ_2 507 530 IPR003591 -
Aed3g0868 970 SMART LRR_typ_2 387 410 IPR003591 -
Aed3g0868 970 SMART LRR_typ_2 288 311 IPR003591 -
Aed3g0868 970 SMART LRR_typ_2 531 555 IPR003591 -
Aed3g0868 970 SMART LRR_typ_2 216 240 IPR003591 -
Aed3g0868 970 SMART LRR_typ_2 411 435 IPR003591 -
Aed3g0868 970 SMART LRR_typ_2 119 143 IPR003591 -
Aed3g0868 970 SMART LRR_typ_2 312 336 IPR003591 -
Aed3g0868 970 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Aed3g0868 970 Pfam Leucine rich repeat 290 349 IPR001611 GO:0005515
Aed3g0868 970 Pfam Leucine rich repeat 461 520 IPR001611 GO:0005515
Aed3g0868 970 Pfam Leucine rich repeat 389 448 IPR001611 GO:0005515
Aed3g0868 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 961 - -
Aed3g0868 970 Gene3D Phosphorylase Kinase; domain 1 675 763 - -
Aed3g0868 970 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 961 - -
Aed3g0868 970 SUPERFAMILY L domain-like 257 582 - -
Aed3g0868 970 Pfam Leucine Rich Repeat 195 216 IPR001611 GO:0005515
Aed3g0868 970 Pfam Leucine Rich Repeat 243 263 IPR001611 GO:0005515
Aed3g0868 970 ProSitePatterns Protein kinases ATP-binding region signature. 693 716 IPR017441 GO:0005524
Aed3g0868 970 Gene3D Ribonuclease Inhibitor 190 284 IPR032675 -
Aed3g0868 970 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Aed3g0868 970 SMART LRR_sd22_2 192 215 - -
Aed3g0868 970 SMART LRR_sd22_2 288 314 - -
Aed3g0868 970 SMART LRR_sd22_2 435 458 - -
Aed3g0868 970 SMART LRR_sd22_2 507 533 - -
Aed3g0868 970 ProSiteProfiles Protein kinase domain profile. 687 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0868 970 SUPERFAMILY Protein kinase-like (PK-like) 688 960 IPR011009 -
Aed3g0868 970 SUPERFAMILY L domain-like 48 370 - -
Aed3g0868 970 CDD STKc_IRAK 693 959 - -
Aed3g0868 970 Pfam Protein kinase domain 688 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0868 Aed-Chr3 6353598 6358103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0868 4 969 Receptor kinase-like Gene Family AT3G56370 61.111 0.0 1118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Aed3g0868 Pkinase 5.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0868 - - gmx:100790365 1772.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0868 3 6353598 6358103 Aed3g0868 3 6353598 6358103 ECH