Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0864 ATGGACAACCTTGGTTCGAGTAGTCGTAGGAAAGCAATTGAGGAGATTCTGATGAAAGGGCGTGATTGTGCTAAACAACTTACAAGTGTCATCAATGGGAGCTGTGAAGATGGATCATCATCATCAGCAGCTATAACCCCATTTGCTGAACACCTTGTGAAGGAGGTGCTTATGTCCTTCACAAACTCCCTCCTGGTTTTGTACAACAACAACAATAACAACCCCACTTCGGATCAATCCCATGATGTCGTCTCCAATGCTCAAGTTTGGGACTCTCCCAACTCTGAGGACTCTCAAGAGAGCAATTGCAAGAGCTCCACAATTAAGGAACGAAGAGGGTGCTACAAGAGAAGAAGAACTGAACAAACATGGGAGAAGGAGTCTGATGCTCCAATTGATGATGGCCATCAGTGGAGAAAGTATGGCCAAAAAGAGATCCTGAATGCCAAATTCCCAAGGAACTACTATCGGTGCACTCACAAATATGATCAAGGTTGCCAAGCAACAAAACAGCTGCAAAAAGTTCAAGAGGTTCCAATCCTATTCAAGACCACTTACTATGGCCACCACACTTGCAAGAACTTGTCAAACCCTGAGATTATACTTGACCCTATGTCCCCTTCTGCCTCATCCAAGTTCCTAAGCTTTGACAGCTCCTTCCCAACCCCATCAAACCAAGAGTGTCCCTTTTTCTCATCTTCATTCCCATCATCATCAGTGAAAAGGGAGGAGTGCAAGGAAGAGGAGGTTCTTCCTCCTTCAACTTCCTCCAATGATTACCTCATCTCTTCTGATCTCACTTTTGATGGTCATAGCTCACCAACAAGGCATTTCACTCTATTATCATCAACACTTGACTCTGAGTACAAGAGTAGTGTGGACATTTCGGATGTCTTATATGATCCTTCTCACCTTGACGTTGATGATGTCTTTCAACCCTTCCTTGATCATGAATTTAGATGA 963 0.4382 MDNLGSSSRRKAIEEILMKGRDCAKQLTSVINGSCEDGSSSSAAITPFAEHLVKEVLMSFTNSLLVLYNNNNNNPTSDQSHDVVSNAQVWDSPNSEDSQESNCKSSTIKERRGCYKRRRTEQTWEKESDAPIDDGHQWRKYGQKEILNAKFPRNYYRCTHKYDQGCQATKQLQKVQEVPILFKTTYYGHHTCKNLSNPEIILDPMSPSASSKFLSFDSSFPTPSNQECPFFSSSFPSSSVKREECKEEEVLPPSTSSNDYLISSDLTFDGHSSPTRHFTLLSSTLDSEYKSSVDISDVLYDPSHLDVDDVFQPFLDHEFR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0864 320 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 10 288 - -
Aed3g0864 320 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0864 320 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0864 320 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g0864 320 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0864 320 Gene3D WRKY domain 103 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g0864 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 288 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0864 Aed-Chr3 6312257 6314365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0864 8 192 WRKY Transcription Factor Family AT3G56400 40.933 4.85e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g0864 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0864 - - gmx:100170682 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0864 3 6312257 6314365 Aed3g0864 3 6312257 6314365 ECH