Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed3g0864 | ATGGACAACCTTGGTTCGAGTAGTCGTAGGAAAGCAATTGAGGAGATTCTGATGAAAGGGCGTGATTGTGCTAAACAACTTACAAGTGTCATCAATGGGAGCTGTGAAGATGGATCATCATCATCAGCAGCTATAACCCCATTTGCTGAACACCTTGTGAAGGAGGTGCTTATGTCCTTCACAAACTCCCTCCTGGTTTTGTACAACAACAACAATAACAACCCCACTTCGGATCAATCCCATGATGTCGTCTCCAATGCTCAAGTTTGGGACTCTCCCAACTCTGAGGACTCTCAAGAGAGCAATTGCAAGAGCTCCACAATTAAGGAACGAAGAGGGTGCTACAAGAGAAGAAGAACTGAACAAACATGGGAGAAGGAGTCTGATGCTCCAATTGATGATGGCCATCAGTGGAGAAAGTATGGCCAAAAAGAGATCCTGAATGCCAAATTCCCAAGGAACTACTATCGGTGCACTCACAAATATGATCAAGGTTGCCAAGCAACAAAACAGCTGCAAAAAGTTCAAGAGGTTCCAATCCTATTCAAGACCACTTACTATGGCCACCACACTTGCAAGAACTTGTCAAACCCTGAGATTATACTTGACCCTATGTCCCCTTCTGCCTCATCCAAGTTCCTAAGCTTTGACAGCTCCTTCCCAACCCCATCAAACCAAGAGTGTCCCTTTTTCTCATCTTCATTCCCATCATCATCAGTGAAAAGGGAGGAGTGCAAGGAAGAGGAGGTTCTTCCTCCTTCAACTTCCTCCAATGATTACCTCATCTCTTCTGATCTCACTTTTGATGGTCATAGCTCACCAACAAGGCATTTCACTCTATTATCATCAACACTTGACTCTGAGTACAAGAGTAGTGTGGACATTTCGGATGTCTTATATGATCCTTCTCACCTTGACGTTGATGATGTCTTTCAACCCTTCCTTGATCATGAATTTAGATGA | 963 | 0.4382 | MDNLGSSSRRKAIEEILMKGRDCAKQLTSVINGSCEDGSSSSAAITPFAEHLVKEVLMSFTNSLLVLYNNNNNNPTSDQSHDVVSNAQVWDSPNSEDSQESNCKSSTIKERRGCYKRRRTEQTWEKESDAPIDDGHQWRKYGQKEILNAKFPRNYYRCTHKYDQGCQATKQLQKVQEVPILFKTTYYGHHTCKNLSNPEIILDPMSPSASSKFLSFDSSFPTPSNQECPFFSSSFPSSSVKREECKEEEVLPPSTSSNDYLISSDLTFDGHSSPTRHFTLLSSTLDSEYKSSVDISDVLYDPSHLDVDDVFQPFLDHEFR | 320 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed3g0864 | 320 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 10 | 288 | - | - | |
Aed3g0864 | 320 | SMART | WRKY_cls | 132 | 194 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed3g0864 | 320 | Pfam | WRKY DNA -binding domain | 133 | 193 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed3g0864 | 320 | ProSiteProfiles | WRKY domain profile. | 127 | 190 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed3g0864 | 320 | SUPERFAMILY | WRKY DNA-binding domain | 130 | 193 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed3g0864 | 320 | Gene3D | WRKY domain | 103 | 194 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed3g0864 | 320 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 10 | 288 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed3g0864 | Aed-Chr3 | 6312257 | 6314365 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed3g0864 | 8 | 192 | WRKY Transcription Factor Family | AT3G56400 | 40.933 | 4.85e-37 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aed3g0864 | WRKY | 3.7e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed3g0864 | - | - | gmx:100170682 | 431.409 |