Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0863 ATGAGTTCTGATGAGACCTTGCTTTTGGAATCGTCGGATTCTCGCCCTGTGATTCACCACCGCCGTGGGAAATCTGGTTCCCGTAGCCACCTCTCCGGCGGTGGCCATGGCTCCCTCTCGTCGTCCTCCGTGTTCGACGATGCTGCTGCTTTCGTTGAGAGCATCGATTTGGATGCTGTGAAGGAGCGAGACGCGGGGGACGTTGTGTTGTCTAGTGATTGTAGTTTGCACTCTGCATCGGTGGTTCGGAACAACGGTGTTGGTTCTGAGGCACAGTTCCCGTGGCAGTTTCCCTTGGAATGCCCCCCGCGTCGTGAAAGGGGGCGCTCGGCATCGTGGGGTGCAATGGAACTGCATGATGCCGATGGCCGGAGCGCGCCGTTTGAGATAGCCGGAGCTTCATCTCAGGTGGTGCAGCAGGACAGGTTGAATAATAGTAAATCACAGAGAATTCGGCACAGGAGTGTGCAATTTGATGATGCTGCCTTGCACGAGGAGAGTGCCAGGCTGATCTATATCAATGATCCGAGGAGGACTAATGATAAGTATGAGTTCACCGGGAACGAGATCCGGACTAGCCGATACACCTTTGTTACCTTTTTGCCCAAGAATCTGTTCATTCAGTTTCATCGCGTGGCGTATCTGTATTTCCTTGCTATTGCAGCTCTCAATCAGCTTCCTCCTTTGGCTGTGTTTGGGAGGACGGTGTCTCTTTTCCCACTCTTGTTTGTGCTTTGTGTCACCGCCATTAAGGATGGCTACGAGGATTGGCGGAGGCACAGGTCGGATCGCAATGAGAACAACCGGGAGTCTCTCGTGCTTCAGTCCGATGATTTCCGGTCGAAGAAATGGAAGAAGATACAAGCTGGCGAGGTTGTTAAGATCTTTGCCGATGAGACAATTCCGGCTGACATGGTGTTGTTGGGGACGAGTGATCAAAGTGGCCTTGCCTATATTCAGACAATGAATTTGGATGGAGAATCAAATTTGAAGACAAGATATGCTAGGCAGGAAACAGCTTCAGCAGTTGCGGCAGAGGCTTGTGATGTTTTTGGGGTAATTAGATGTGAGCAACCGAACCGGAATATTTATGAGTTCACGGCCAACATGGAGTTCAATGGACTTAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGCTGCCAACTGAAGAACACGGATTGGATAATTGGTGTCGTGGTTTATGCAGGACAGGAAACAAAAGCAATGTTGAACAGTGCAGCTTCTCCTTCCAAGAGAAGCAGACTGGAAACTTACATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTTATCATGTGTTTGGTTGTGGCCATTGGGATGTGTCTTTGGCTGGTACGCCACAAGAACCAGCTGGATACCTTGCCTTACTACAGAAAAAGATACTTCTCCAATGGACCAGATAATGGAAAGAAATATAAGTATTATGGGATACCAATGGAAGCATTTTTCTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATTATGATACCAATATCTCTTTACATCACAATGGAGTTGGTTCGATTGGGTCAGTCATACTTCATGATTGAAGACAGGGATATGTATGATGTCAGCTCTGGGTCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCAGACAAGACAGGAACACTAACAGAAAACAAAATGGAATTCAAGAGGGCTAGTGTACATGGGAAGAATTACGGGAGCTCCTTGCCTATGGTTGATAATACAGCAGATGTTATTCCAAAACAGAGATGGAAGCTCAAATCTGAAATTGCAGTTGATTCTGAGTTGATGACAATGTTGCGGAAAGACTCAAATAGAGAAGAAAAAGTGGCTGCTCATGAGTTTTTTCTTACTTTGGCTGCTTGTAACACTGTAATCCCTATACTTGGTGATGATGGATTTTCCAGTCTTGGAACTAATGAACCAATTGAAGATATTAGACGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTGCATATGGATACACTCTGTTTGAACGCACATCTGGACATATTGTTATTGACGTCAACGGTGAGAAACTCAGATTGGACGTATTGGGCCTGCATGAGTTTGATAGTGTGCGGAAGAGAATGTCTGTTGTTATTCGGTTTCCTGACAATGCAGTAAAGGTGTTAGTCAAAGGTGCTGATACTTCAATGTTTAGCATTTTGGAAAATGGCAGTGAGAGTAACAATAACATAGGGCATGCAACTCAGAGCCATTTGAATGAATATTCTTCACAAGGTTTGCGCACTCTTGTAGTTGCCTCCAGGGATCTTTCTGATGCAGAGCTTGAGGAGTGGCAAAGTAGGTATGAAGAGGCAAGCACTTCATTGACCGACAGAGCTACTAAACTACGGCAAACAGCAGCTCTTATAGAAAGCAATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAGGAGGGTGTACCAGAAGCAATTGAGGCTCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACGGCAATTTCAATTGGCCTTTCCTGCAAACTTCTTAGTGGAGATATGCAGCAGATTATTATAAATGGCACTTCAGAGGTCGAATGTAGAAATCTTTTGGCTGATGCTAAAGCTAAATATGGTGTGAAATCTTTGAGTGGAGGAGGGCGTCGGAATCTGAAGCACAAAACCAATGCTGGACACGGTGATCTTGATATTCCCAATGGTTCAAAGTCTTTGAGCTTTCCCAAATGGAATACTGGAAATGAAGAAGGAACTAATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTGTGCTGTCGAGTTGCACCCTTGCAAAAGGCAGGAATTGTTGATATGATAAAGAGCCGCACAGATGATATGACACTGGCCATAGGCGATGGGGCCAATGACGTGTCAATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGATGATGTTATTTTGGTATATATTATGCACGGCTTTTTCCACAACTTCTGCATTGACAGATTGGAGTAGCGTTTTCTATTCTGTGATATACACATCTATACCTACTATTATTGTTGGTATTCAGGACAAGGACTTGAGTCACAAGACACTCTTGCAGTATCCAAAACTGTATGGTGCAGGTCACAGGCATGAAGCTTACAATATGCAATTATTTTGGATCACAATGATGGACACAGTATGGCAGAGCCTTGTTCTTTTCTACATCCCATTGTTCACTTACAAGGACAGTTCTATTGATATATGGAGCATGGGCAGTTTGTGGACGATTGCAGTTGTTATCCTTGTAAATGTACACTTGGCTATGGACATCAACCGCTGGGTATTAATTACTCATTTTGCTATCTGGGGATCGATAATCATTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTCTTTCCCAATTACTGGACTATTTATCATCTGGCAAGGTCCCCTGCATATTGGATAACAATTTTGCTTATAATTATTGTGGCTTTGCTTCCTCGCTTTACTTGCAAAGTTGTTTATCAAATCTTTTGGCCATCGGATGTCCAGATAGCTAGAGAAGCCGAGTTAATGAAAAAACGACCTGATAATTTGCAGCCTAGGCAACAAGTTTCCAGTTAA 3915 0.4388 MSSDETLLLESSDSRPVIHHRRGKSGSRSHLSGGGHGSLSSSSVFDDAAAFVESIDLDAVKERDAGDVVLSSDCSLHSASVVRNNGVGSEAQFPWQFPLECPPRRERGRSASWGAMELHDADGRSAPFEIAGASSQVVQQDRLNNSKSQRIRHRSVQFDDAALHEESARLIYINDPRRTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSDDFRSKKWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASAVAAEACDVFGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLETYMNRETLWLSIFLFIMCLVVAIGMCLWLVRHKNQLDTLPYYRKRYFSNGPDNGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDVSSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFKRASVHGKNYGSSLPMVDNTADVIPKQRWKLKSEIAVDSELMTMLRKDSNREEKVAAHEFFLTLAACNTVIPILGDDGFSSLGTNEPIEDIRRIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMFSILENGSESNNNIGHATQSHLNEYSSQGLRTLVVASRDLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRNLLADAKAKYGVKSLSGGGRRNLKHKTNAGHGDLDIPNGSKSLSFPKWNTGNEEGTNAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDMIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVMMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGIQDKDLSHKTLLQYPKLYGAGHRHEAYNMQLFWITMMDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLAMDINRWVLITHFAIWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPAYWITILLIIIVALLPRFTCKVVYQIFWPSDVQIAREAELMKKRPDNLQPRQQVSS 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0863 1304 Pfam Phospholipid-translocating P-type ATPase C-terminal 1038 1278 IPR032630 -
Aed3g0863 1304 Gene3D - 821 1050 IPR023214 -
Aed3g0863 1304 SUPERFAMILY HAD-like 545 1054 IPR036412 -
Aed3g0863 1304 ProSitePatterns E1-E2 ATPases phosphorylation site. 560 566 IPR018303 -
Aed3g0863 1304 SUPERFAMILY Calcium ATPase, transduction domain A 269 410 IPR008250 -
Aed3g0863 1304 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 564 838 IPR023299 GO:0000166
Aed3g0863 1304 SFLD p-type atpase 542 1061 IPR044492 -
Aed3g0863 1304 Pfam Phospholipid-translocating ATPase N-terminal 171 236 IPR032631 -
Aed3g0863 1304 Pfam E1-E2 ATPase 269 516 - -
Aed3g0863 1304 SUPERFAMILY Calcium ATPase, transmembrane domain M 185 1277 IPR023298 -
Aed3g0863 1304 Pfam Cation transport ATPase (P-type) 671 746 - -
Aed3g0863 1304 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 162 1302 - -
Aed3g0863 1304 CDD P-type_ATPase_APLT_Dnf-like 187 1170 - -
Aed3g0863 1304 PRINTS P-type cation-transporting ATPase superfamily signature 558 572 - -
Aed3g0863 1304 PRINTS P-type cation-transporting ATPase superfamily signature 1010 1029 - -
Aed3g0863 1304 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 185 1285 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aed3g0863 1304 Gene3D - 668 804 IPR023299 GO:0000166
Aed3g0863 1304 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 162 1302 - -
Aed3g0863 1304 MobiDBLite consensus disorder prediction 1 39 - -
Aed3g0863 1304 SFLD Haloacid Dehalogenase 542 1061 - -
Aed3g0863 1304 Gene3D - 244 414 - -
Aed3g0863 1304 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 980 1096 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed3g0863 1304 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 491 581 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed3g0863 1304 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 815 873 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0863 Aed-Chr3 6299916 6307833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0863 148 1287 Primary Pumps ATPases AT5G04930 57.612 0.0 1344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0863 K14802 - gmx:100789830 2342.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0863 3 6299916 6307833 Aed3g0863 3 6299916 6307833 ECH