Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0859 TATTATAAGTGCATTTATTTATTTTTTACCTATTTTTTCTTTTCTTCCATCCTGTATTCCTATTTCATCACCATCCTCCCTTCACCAAACGAAGCAGAAATGTTGATTGTCAATTGGATCTTCATGAGTTCAACAACCACTGGAGCATACTTCGTTTCCTGTGTTGCGGGAAACAAGAACAACGACCTCTTCTGCTGGGTTTTGCTCTGCTTGCTGCCAAAATTCTTGGGAACTCCATTTGCCTACATCAACTTTCTCTTGATTCAGGCAATTGACAGGAGTCCATCAGCCGCCGGGGTTTTGGGAAACTTTGGGGTGTTTTCTGGTTTCACTATGGCTAGCTACAAACCTTCACAGACTCCGTTACTCTTTCCTGCAAACCTTCCTGATTCTGTGGACACGGAGCATATTGAGCTGGATTTCTCTGATGTCTTTGGTCCTATATCGGTAGATTTGAATAACATTGATTCCACTACTGGTGAGCCTGTAGAGGAAATGAATGACCTGGTTTATGATGACCCACCAGTGATTTACACCCGCTCGCATTCTCTGGTTGGCCCTTCAACTTGTGTTAGTCAATTACTTAAGCTTGGCAAACTCACCATACACGAGACTGAGGATTTGTTGGAACTAGTGGAGCAAGTCGATGGAGAGACCATTAAAGACATCAAAGAATCTTCCTTTGTGGAGGAATCATTGAAAGATGAAGATGGGAATCTCATGAAGATCCAGAGAGTTAGCATTGAAGATTTTGAGATTTTGAAGGTTGTGGGGCAGGGTGCATTTGCAAAAGTATATCAGGTGAGGAAAAAGGGTACTTCAGATATATATGCGATGAAGGTTATGCGGAAGGACAAGATTATGGAGAAGAACCATGCTGAATACATGAAAGCTGAGAGGGATATTTGGACAAAGATAGAACACCCATTTGTTGTTCAACTCCGATACTGTTTTCAGACTGTATCTTGTGATGGATTTTGTAAATGGGGGCCATCTCTTCTTCCAGCTTTATCACCAAGGCCTATTCAGCCGCCTTTTTGTGGTGGGAGCCGTGACAAAATTCAGCAGAAGATAGTTAAAGACAAGATTAAGCTGCCAGCATTTTTGTCAAGCGAAGCACATTCACTGTTGAAAGGGCTGCTACAGAAGGAACCAGCTAGGCGCTTAGGTTGTGGAGCCCGGGGTGTTGAGGAAATCAAAGGCCACAAGTGGTTTAAACCAATCAATTGGAGAAAGTTGGAAGCACGAGAAATCCAACCAAGCTTCAGGCCAGAAGTAGCTGGTAGGCACTGTGTTGCCAACTTTGAGAAGCGGTGGACTGATATGCCTGTCGTGGACTCGCCGGCCGCTAGCCCTAATGGTGGAAATCCCTTTAAGGGCTTCACTTATGTGAGGCCTGCAGCCTCTTTTCTTCAAAGGAATAGCCCTGCTTACTTACTTGACAGCTTGAATGATATACACACTGTCACAATTGCCAACAGGAAACATTTTCTTGTGCCCTTAGTAAAGGTTGGAATTGATGGAGCAGAGGAATTTGGCGATTTTGAGGAGTGGTTCAATTACAGACTCTCTAGAGCAGCTCCTGAAACATGTGCTAAGTTTCTTGGAAGTTTTGTAGCTGATAAAACCAATTCACTGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGGTCGTTCTCTTGCTGGTTACATGGCTGATCAGAGCTTCCCTTCAAACTTGGAGTCTATCATGTTTGGACGTGTCTTGCAAGGCGTAGACTCTTCAAAACGAAACGCCTTGATCATCAAGCAAATAATGCGCCAGATCATTACATCTCTCAAGAAAATTCATGACACCGGCATTGTTCACAGGGATGTTAAACCTGCCAACTTGGTGGTTACCAAACGGGGCCAGATTAAACTCATTGATTTTGGTTCAGCAACAGACCTTCGAATCGGAAAGAATTATGTTCCCAATTGTACACCTTTGGATCGTGACTACTGTCCCCCTGAACTATATGTGCTACCTGAAGAAACACTAAGTCTTCCACCAGAGCCTATTGCTGCTTTCCTTTCACCAATCTTGTGGCAGTTAAAAGCAAAACCTTGGACTGAGGAGGACAATAGTCAAGAAGATACTCTGAGTATAAATCGATAA 2148 0.4334 YYKCIYLFFTYFFFSSILYSYFITILPSPNEAEMLIVNWIFMSSTTTGAYFVSCVAGNKNNDLFCWVLLCLLPKFLGTPFAYINFLLIQAIDRSPSAAGVLGNFGVFSGFTMASYKPSQTPLLFPANLPDSVDTEHIELDFSDVFGPISVDLNNIDSTTGEPVEEMNDLVYDDPPVIYTRSHSLVGPSTCVSQLLKLGKLTIHETEDLLELVEQVDGETIKDIKESSFVEESLKDEDGNLMKIQRVSIEDFEILKVVGQGAFAKVYQVRKKGTSDIYAMKVMRKDKIMEKNHAEYMKAERDIWTKIEHPFVVQLRYCFQTVSCDGFCKWGPSLLPALSPRPIQPPFCGGSRDKIQQKIVKDKIKLPAFLSSEAHSLLKGLLQKEPARRLGCGARGVEEIKGHKWFKPINWRKLEAREIQPSFRPEVAGRHCVANFEKRWTDMPVVDSPAASPNGGNPFKGFTYVRPAASFLQRNSPAYLLDSLNDIHTVTIANRKHFLVPLVKVGIDGAEEFGDFEEWFNYRLSRAAPETCAKFLGSFVADKTNSLFTKGGKWLVWKFEGGRSLAGYMADQSFPSNLESIMFGRVLQGVDSSKRNALIIKQIMRQIITSLKKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGSATDLRIGKNYVPNCTPLDRDYCPPELYVLPEETLSLPPEPIAAFLSPILWQLKAKPWTEEDNSQEDTLSINR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0859 715 ProSiteProfiles AGC-kinase C-terminal domain profile. 406 473 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed3g0859 715 Gene3D Transferase(Phosphotransferase) domain 1 343 424 - -
Aed3g0859 715 SMART pkinase_C_6 406 465 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed3g0859 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Aed3g0859 715 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 343 476 - -
Aed3g0859 715 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 605 648 - -
Aed3g0859 715 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 108 320 - -
Aed3g0859 715 Gene3D Phosphorylase Kinase; domain 1 482 558 - -
Aed3g0859 715 ProSitePatterns Protein kinases ATP-binding region signature. 257 280 IPR017441 GO:0005524
Aed3g0859 715 Gene3D Phosphorylase Kinase; domain 1 425 446 - -
Aed3g0859 715 SUPERFAMILY Protein kinase-like (PK-like) 549 670 IPR011009 -
Aed3g0859 715 Pfam Protein kinase C terminal domain 427 463 IPR017892 GO:0004674|GO:0005524|GO:0006468
Aed3g0859 715 PANTHER RIBOSOMAL PROTEIN S6 KINASE 343 476 - -
Aed3g0859 715 PANTHER RIBOSOMAL PROTEIN S6 KINASE 605 648 - -
Aed3g0859 715 PANTHER RIBOSOMAL PROTEIN S6 KINASE 108 320 - -
Aed3g0859 715 SUPERFAMILY Protein kinase-like (PK-like) 240 320 IPR011009 -
Aed3g0859 715 Gene3D Phosphorylase Kinase; domain 1 192 323 - -
Aed3g0859 715 SMART serkin_6 251 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0859 715 Gene3D Transferase(Phosphotransferase) domain 1 589 702 - -
Aed3g0859 715 ProSiteProfiles Protein kinase domain profile. 251 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0859 715 SUPERFAMILY Protein kinase-like (PK-like) 343 463 IPR011009 -
Aed3g0859 715 Pfam Protein kinase domain 598 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0859 715 Pfam Protein kinase domain 251 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0859 Aed-Chr3 6268944 6288355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0859 605 669 AGC Kinase Gene Family AT3G08720 32.308 7.55e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Aed3g0859 Pkinase 3.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0859 - K04688 gmx:100804819 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0859 3 6268944 6288355 Aed3g0859 3 6268944 6288355 ECH