Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0848 ATGCCGGCTCTGAGAATTCATGGATATGCCTTGGCTGTTTCGTTTTGTCTTATCACCTTCATAGCAGCTTCACAACCAACAGACCCTTCAGAAGTTCATGCACTGATAGAGTTCAAGAAAAGTTTGATTGATACTTACAACAATCTTAAGAGCTGGAATAAAGGAGATCCATGTTCAGCAAACTGGACTGGGGTTTGGTGTTTTGAAAAGAAGGGAGATGATGGGTACTTCCATGTTCATGAGATCTACTTAATGACAATGAATCTCTCGGGAACTCTATCACCTCAGCTTGGTCAGCTATCCCAACTTGAGATACTGGATATCATGTGGAACAATCTGACAGGCACAATACCAAAGGAGATTGGAAATATTAAAACATTGAAACTCTTGCTTCTGAATGGAAATAACTTATCTGGTAGTTTACCGGATGAACTTGGCAACCTTTCAAATTTGAATAGACTCCAAGTAGACGAAAACCAAATGTCAGGACCTATACCAGAGTCATTTTCCAACATGACCAATGTTAAACACCTTCACTTGAACAACAACTCATTTAGTGGTCCACTTCCATCCACATTTTCAAAGCTATCAAATCTTATGCACTTGCTTGTGGACAACAATAATTTATCTGGCCGTCTTCCACCAGAATACTCCTTGTTACATGGATTAGAAATACTCCAGCTTGATAACAACAATTTCAGTGGGAGTGAAATTCCTTCTACCTATGCAAAGCTAACCAAGCTAGTTAAATTAAGTGTACGAAACTGCAATCTGCAAGGAGCCATTCCTGATTTCAGTTCAATACCCATGCTTACCTATTTAGATCTTAGCTGGAATCAGTTCACTGGATCCATACCATTAAATAAAGTGGCAGACAATATGACAACTTTGTCACTTGCAAACAATTTACTGTCTGGATCTATCCCTGCTAGCATATGGAAGAATATGTCCTTCGGTGCAAAAGATAAACTTTTAATTGATCTCGATAACAACTCATTTGTGGATGTTTTGGGAAATCTAAACCCCCCAAAAAATGTTACCTTGAGGCTTTCTGGTAATCCTATCTGCAAGAATTCTAGCATACAAAGTATTGGTCAATATTGTGGACCTGAAGGAGATTTTGCAGCACAAGACTCAACAAACTCAACAACTGTCTGTCCAGTTCAATCTTGTCCAGGGGATTTCTTTTATGAATATGCCCCCTCTTCCCCAGTTCCTTGCTTTTGTGCAGCACCTCTGAGAATTGGATACAGGCTGAAAAGTCCAAGTTTTTCTTACTTTGCTCCCTATAGAACTAGTTTTGAAGACTATATAACTATGTCCTTGAAGTTAGATCCCTATCAACTATCAATAGCTTCGGTTGCTTGGGAAGAGGGACCTCGTCTTAGAATGTATTTGAAACTGTTCCCTTCCTATAATGATTCCCGTTCTAATACGTTCAATGAAAGTGAGGTCCGTCGCATTAAAGGCGCATTTACATCATGGCACTTTCCTCACTCTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTTCTTGGACCTTATGCAGATTTAAATCTTGATTCGGAGAAGAAAAAAATTAGTGTGGGCATAAAAATTGCAGCTGTGTTAGCAGCTGCTGCTTGTGCTTTAGCAATATCTGCAATAATCATTCTCGTGATTTCTAGAAGAAATATCAAATACCATAAGAGGATTTCCAGGAAACGAACATCTATTAATGTATCTATCAAAATAGATGGCATGAAGGAATTTACTTACAAACAACTGGCTCTTGCTACCAACAAATTTAATATCTCAAATAAAGTTGGCCAGGGAGGTTATGGGAATGTCTATAAAGGCATTTTATCTGATGAAACTTTTGTGGCTGTTAAGCGAGCAGAAGAAAGTTCCTTACAAGGACAAAAAGAGTTTCTGACTGAGATTGAGCTTTTGTCAAGGGTACACCATCGGAACCTTGTCTCACTGATTGGATACTGTAATGAAGAAGGAGAGCAGATGCTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGACTGGATTTCTGACAGCAGAATGGGGTTATATCCAACTGATTGCTTGGACAAGTTCCTAGCTCTGGCCCTCAGATGTTGCCAAGACAATCCAGAGGAGAGACCGTCAATGTTAGATGTGGTGAGGGAACTGGAAGACATCATTGCTATGTTGCCTGAACCTGAAATTCTTTTCTCAGATGTTAGCTTAGACAATTCTGGTAACATAGCACCGCCATCATCGTCAGCATCAACCTCAGCATCCCACGTGACAAGGGAGGAGCAACACATGTCCGCTTATGTGTCAGGAAGTGATCTTGTCAGTGATGTCATTCCCACCATTGTTCCTCGCTGA 2373 0.4008 MPALRIHGYALAVSFCLITFIAASQPTDPSEVHALIEFKKSLIDTYNNLKSWNKGDPCSANWTGVWCFEKKGDDGYFHVHEIYLMTMNLSGTLSPQLGQLSQLEILDIMWNNLTGTIPKEIGNIKTLKLLLLNGNNLSGSLPDELGNLSNLNRLQVDENQMSGPIPESFSNMTNVKHLHLNNNSFSGPLPSTFSKLSNLMHLLVDNNNLSGRLPPEYSLLHGLEILQLDNNNFSGSEIPSTYAKLTKLVKLSVRNCNLQGAIPDFSSIPMLTYLDLSWNQFTGSIPLNKVADNMTTLSLANNLLSGSIPASIWKNMSFGAKDKLLIDLDNNSFVDVLGNLNPPKNVTLRLSGNPICKNSSIQSIGQYCGPEGDFAAQDSTNSTTVCPVQSCPGDFFYEYAPSSPVPCFCAAPLRIGYRLKSPSFSYFAPYRTSFEDYITMSLKLDPYQLSIASVAWEEGPRLRMYLKLFPSYNDSRSNTFNESEVRRIKGAFTSWHFPHSDFFGPYELLNFTLLGPYADLNLDSEKKKISVGIKIAAVLAAAACALAISAIIILVISRRNIKYHKRISRKRTSINVSIKIDGMKEFTYKQLALATNKFNISNKVGQGGYGNVYKGILSDETFVAVKRAEESSLQGQKEFLTEIELLSRVHHRNLVSLIGYCNEEGEQMLVYEFMPNGTLRDWISDSRMGLYPTDCLDKFLALALRCCQDNPEERPSMLDVVRELEDIIAMLPEPEILFSDVSLDNSGNIAPPSSSASTSASHVTREEQHMSAYVSGSDLVSDVIPTIVPR 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0848 790 Gene3D Phosphorylase Kinase; domain 1 568 673 - -
Aed3g0848 790 ProSiteProfiles Protein kinase domain profile. 598 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0848 790 Pfam Leucine rich repeat 149 209 IPR001611 GO:0005515
Aed3g0848 790 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 684 758 - -
Aed3g0848 790 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 684 - -
Aed3g0848 790 SUPERFAMILY L domain-like 27 358 - -
Aed3g0848 790 SUPERFAMILY Protein kinase-like (PK-like) 690 752 IPR011009 -
Aed3g0848 790 Gene3D Ribonuclease Inhibitor 162 367 IPR032675 -
Aed3g0848 790 SUPERFAMILY Protein kinase-like (PK-like) 567 688 IPR011009 -
Aed3g0848 790 MobiDBLite consensus disorder prediction 749 768 - -
Aed3g0848 790 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Aed3g0848 790 Gene3D Ribonuclease Inhibitor 30 149 IPR032675 -
Aed3g0848 790 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Aed3g0848 790 Pfam Protein tyrosine and serine/threonine kinase 599 686 IPR001245 GO:0004672|GO:0006468
Aed3g0848 790 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 684 758 - -
Aed3g0848 790 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0848 Aed-Chr3 6168435 6176708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0848 526 735 Receptor kinase-like Gene Family AT5G01950 27.442 4.97e-09 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Aed3g0848 PK_Tyr_Ser-Thr 1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0848 - - gmx:100809775 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0848 3 6168435 6176708 Aed3g0848 3 6168435 6176708 ECH