Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0825 ATGGGCAATTGCGGAACCAGAGAGGAATCTGCCGTAGTTTCTAACGCTCAAGTTGTTCAGCAGCTTCACCATGCGACTTCGTTGGGCGCAAGCGCGAGGAGCCAGAATAATGCGGGTAGCGAGAAGAAGCATCACGGTCACAGGCAGAATCTGAGCGAGTGCGCTTCGGATCTGAGCGAGTCGTGTTCGACACCGCGCGGTAACAATAGCAGCAGCAGCAACACGCTGCTCTACACGCACGTGATCGCGTTCACGCTCTACGAGCTTGAGACCATAACCAAGAGCTTCCGCGGCGACTACATCCTCGGCGAGGGAGGCTTCGGCACCGTTTACAAAGGCTACATTGACGAGAACGTCAGAGTTGGACTCAAATCGCTCCCTGTTGCTGTCAAAGTCTTGAACAAAGAGGGTTTACAAGGACATCGAGAGTGGCTTGCAACTGTCCCTTTATCATGGGCTACAAGAATGATGATTGCTCTTGGAGCAGCCAAAGGACTTGCCTTTCTCCACAATGCTGAAAGGCCTGTAATCTATCGCGACTTTAAAACGTCTAATATATTATTGGACTCCGACTATACAGCCAAACTTTCTGATTTTGGACTAGCTAAAGCAGGACCACAAGGTGATGAAACCCATGTATCCACTCGAGTCATGGGAACATATGGTTATGCTGCCCCTGAATATAATCAATACTCAGTGAGGGCAGCACAAAAAGCATGTAGCTTGGCTTATTACTGTCTGAGTCAAAATCCCAAAGCGAGGCCACTAATGAGTGATGTAGTTGAGACATTGGAGCCCTTACAAAGTTCAAGTGTTGGTCCAGGTGAAGTCTCATTATCTGGATCAAATAGTGTGAGTGCTGGTCCTTTTGCTATGAACAAAATCTCTGACTACCGGATGCGTCACAAGTTTTCGAACAACGTTGGTCCCGGTGCTAGTTGTCGGTCTCCAAACCCGAATTGCTCACCAGGTGGCCCAGCAACATTGCGGGTCAGATGA 999 0.4915 MGNCGTREESAVVSNAQVVQQLHHATSLGASARSQNNAGSEKKHHGHRQNLSECASDLSESCSTPRGNNSSSSNTLLYTHVIAFTLYELETITKSFRGDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYNQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSSVGPGEVSLSGSNSVSAGPFAMNKISDYRMRHKFSNNVGPGASCRSPNPNCSPGGPATLRVR 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0825 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Aed3g0825 332 MobiDBLite consensus disorder prediction 309 332 - -
Aed3g0825 332 Gene3D Phosphorylase Kinase; domain 1 47 142 - -
Aed3g0825 332 PANTHER OS01G0588500 PROTEIN-RELATED 147 228 - -
Aed3g0825 332 PANTHER OS01G0588500 PROTEIN-RELATED 40 148 - -
Aed3g0825 332 PANTHER OS01G0588500 PROTEIN-RELATED 229 320 - -
Aed3g0825 332 Gene3D Transferase(Phosphotransferase) domain 1 143 284 - -
Aed3g0825 332 SUPERFAMILY Protein kinase-like (PK-like) 69 267 IPR011009 -
Aed3g0825 332 ProSitePatterns Protein kinases ATP-binding region signature. 102 131 IPR017441 GO:0005524
Aed3g0825 332 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 147 228 - -
Aed3g0825 332 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 40 148 - -
Aed3g0825 332 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 229 320 - -
Aed3g0825 332 MobiDBLite consensus disorder prediction 28 72 - -
Aed3g0825 332 MobiDBLite consensus disorder prediction 309 323 - -
Aed3g0825 332 MobiDBLite consensus disorder prediction 52 72 - -
Aed3g0825 332 Pfam Protein kinase domain 154 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0825 332 ProSiteProfiles Protein kinase domain profile. 1 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0825 Aed-Chr3 5914398 5918262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0825 84 230 Glycoside Hydrolase AT3G07070 43.878 2.51e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed3g0825 Pkinase 1.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0825 - - gmx:102662348 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0825 3 5914398 5918262 Aed3g0825 3 5914398 5918262 ECH